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api.rst

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API

Import schist as:

import schist as scs

inference

.. module:: schist.inference


.. autosummary::
   :toctree: generated

   schist.inference.nested_model
   schist.inference.nested_model_multi
   schist.inference.planted_model
   schist.inference.flat_model
   schist.inference.leiden

plotting

.. module:: schist.plotting


.. autosummary::
   :toctree: generated

   schist.plotting.alluvial
   schist.plotting.draw_tree

tools

.. module:: schist.tools


.. autosummary::
   :toctree: generated

   schist.tools.cell_similarity
   schist.tools.cell_stability
   schist.tools.cluster_consistency
   schist.tools.calculate_affinity
   schist.tools.label_transfer