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Since all annotation levels are stored, we can remove the need to keep gt.NestedBlockState in adata.uns['schist']. Once annotations are present, a new state can be easily reconstructed, given that
the graph can be built from connectivities
the block state can be built from nsbm_level entries in adata.obs
This can be done if we make sure that all parameters are stored in the appropriate dictionary.
If this is implemented, there is no need to use schist.io functions to read/write as they are there only to dump the state into a separate pickle
The text was updated successfully, but these errors were encountered:
Since all annotation levels are stored, we can remove the need to keep
gt.NestedBlockState
inadata.uns['schist']
. Once annotations are present, a new state can be easily reconstructed, given thatnsbm_level
entries inadata.obs
This can be done if we make sure that all parameters are stored in the appropriate dictionary.
If this is implemented, there is no need to use
schist.io
functions to read/write as they are there only to dump the state into a separate pickleThe text was updated successfully, but these errors were encountered: