deeptools.rst

deeptools package modules

deeptools.SES_scaleFactor module

.. automodule:: deeptools.SES_scaleFactor
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deeptools.bamHandler module

.. automodule:: deeptools.bamHandler
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deeptools.correlation module

.. automodule:: deeptools.correlation
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deeptools.correlation_heatmap module

.. automodule:: deeptools.correlation_heatmap
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deeptools.countReadsPerBin module

.. automodule:: deeptools.countReadsPerBin
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deeptools.getFragmentAndReadSize module

.. automodule:: deeptools.getFragmentAndReadSize
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deeptools.getRatio module

.. automodule:: deeptools.getRatio
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deeptools.getScorePerBigWigBin module

.. automodule:: deeptools.getScorePerBigWigBin
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deeptools.heatmapper module

.. automodule:: deeptools.heatmapper
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deeptools.heatmapper_utilities module

.. automodule:: deeptools.heatmapper_utilities
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deeptools.mapReduce module

.. automodule:: deeptools.mapReduce
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deeptools.sumCoveragePerBin

.. automodule:: deeptools.sumCoveragePerBin
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deeptools.utilities module

.. automodule:: deeptools.utilities
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deeptools.writeBedGraph module

.. automodule:: deeptools.writeBedGraph
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deeptools.writeBedGraph_bam_and_bw module

.. automodule:: deeptools.writeBedGraph_bam_and_bw
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Module contents

.. automodule:: deeptools
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