- A new parameter for pyGenomeTracks allow to fix the width of the central part:
--plotWidth
- For scale bars, you can now define the position using 2 parameters among
x_center
,size
,scalebar_start_position
andscalebar_end_position
.
- Using conda which is the way we recommand installation it is now possible to use Python 3.8.
- Any version of matplotlib from 3.1.1 to 3.3.2 is now accepted.
- When the
--fontSize
parameter was used it happened that the colorbar labels were not corresponding to the colorbar ticks. This bug has been fixed. - The colormap
pink
was not working because it was both the name of a color and a colormap. This bug has been fixed. - When setting
min_value
,max_value
, if the track was empty these values were ignored. This bug has been fixed. - When using
operation
in bedgraph with asecond_file
, BEDTools is now used to intersect the second file.use_middle
is now taken into account on the second file. - Different handling of string evaluation of color, colormap and operation.