Troubleshoot Docker

kevlar-dev · Jul 14, 2017 · 6370b5d · 6370b5d
1 parent 7a8666e
commit 6370b5d
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/aux/Dockerfile b/aux/Dockerfile
@@ -1,9 +1,13 @@
 FROM ubuntu:16.04
 MAINTAINER Daniel Standage <daniel.standage@gmail.com>
 
+WORKDIR /src/
+COPY ../ /src/
+
 RUN apt-get update && apt-get install -y git build-essential python-dev python-pip bwa
 RUN pip install --upgrade pip setuptools==32.0.0
 RUN pip install pysam==0.11.2.2 networkx==1.11 pandas==0.20.3
 RUN pip install git+https://github.com/dib-lab/khmer.git@6a1f3ec994299ceda4367d75e6aa441ebad12909
+RUN pip install .
 
 CMD bash