Make "kevlar filter" summary output more correct

kevlar-dev · Feb 7, 2018 · 8021e91 · 8021e91
1 parent 1373d63
commit 8021e91
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/kevlar/filter.py b/kevlar/filter.py
@@ -78,7 +78,7 @@ def summarize_validate(readset, n, logfile=sys.stderr):
     message += '\n        '
     message += '{:d} instances'.format(readset.masked[1])
     message += ' of {:d} distinct k-mers'.format(readset.masked[0])
-    message += ' masked by the reference genome'
+    message += ' masked as contaminant or included in reference genome'
     message += '\n        '
     message += '{:d} instances'.format(readset.lowabund[1])
     message += ' of {:d} distinct k-mers'.format(readset.lowabund[0])