Doom freeze when i save (:w) after installing emacs 28

[reyman]

What did you expect to happen?

I install org-transclusion from Nobiot, i try to use it in a simple example (see step to reproduce)

Everything goes well, except when i hit :w , i expect "save", but emacs freeze/hang.

What actually happened?

When i sent pkill -USR2, i have this error in stack (i run using emacs -debug-init) :

Debugger entered--entering a function:
* #f(compiled-function () #<bytecode 0xaffe8c1e39a17>)()
  org-element--parse-to(1587)
  org-element-at-point(1587)
  org-element-cache-map(ignore :granularity headline+inlinetask)
  org-element-cache-map(#f(compiled-function (el) #<bytecode 0x142cbc59694e878f>) :next-re "^\\*+ " :fail-re "^\\*+ " :narrow t)
  org-scan-tags(org-encrypt-entry (lambda (todo tags-list level) (progn (setq org-cached-props nil) (or (and (member "crypt" tags-list))))) nil)
  org-encrypt-entries()
  funcall(org-encrypt-entries)
  (condition-case e (funcall hook) ((debug error) (signal 'doom-hook-error (list hook e))))
  doom-run-hook(org-encrypt-entries)
  run-hook-wrapped(doom-run-hook org-encrypt-entries)
  (condition-case e (run-hook-wrapped hook #'doom-run-hook) ((debug doom-hook-error) (if debug-on-error nil (lwarn hook :error "Error running hook %S because: %s" (if (symbolp (car (cdr e))) (symbol-name (car (cdr e))) (car (cdr e))) (car (cdr (cdr e))))) (signal 'doom-hook-error (cons hook (cdr e)))))
  (let ((hook (car --dolist-tail--))) (condition-case e (run-hook-wrapped hook #'doom-run-hook) ((debug doom-hook-error) (if debug-on-error nil (lwarn hook :error "Error running hook %S because: %s" (if (symbolp (car ...)) (symbol-name (car ...)) (car (cdr e))) (car (cdr (cdr e))))) (signal 'doom-hook-error (cons hook (cdr e))))) (setq --dolist-tail-- (cdr --dolist-tail--)))
  (while --dolist-tail-- (let ((hook (car --dolist-tail--))) (condition-case e (run-hook-wrapped hook #'doom-run-hook) ((debug doom-hook-error) (if debug-on-error nil (lwarn hook :error "Error running hook %S because: %s" (if (symbolp ...) (symbol-name ...) (car ...)) (car (cdr ...)))) (signal 'doom-hook-error (cons hook (cdr e))))) (setq --dolist-tail-- (cdr --dolist-tail--))))
  (let ((--dolist-tail-- hooks)) (while --dolist-tail-- (let ((hook (car --dolist-tail--))) (condition-case e (run-hook-wrapped hook #'doom-run-hook) ((debug doom-hook-error) (if debug-on-error nil (lwarn hook :error "Error running hook %S because: %s" (if ... ... ...) (car ...))) (signal 'doom-hook-error (cons hook (cdr e))))) (setq --dolist-tail-- (cdr --dolist-tail--)))))
  doom-run-hooks(before-save-hook)
  apply(doom-run-hooks before-save-hook)
  run-hooks(before-save-hook)
  basic-save-buffer(nil)
  save-buffer()
  evil-write(nil nil nil nil nil)
  funcall-interactively(evil-write nil nil nil nil nil)
  call-interactively(evil-write)
  evil-ex-call-command(nil #("w" 0 1 (ex-index 1)) nil)
  eval((evil-ex-call-command nil #("w" 0 1 (ex-index 1)) nil))
  evil-ex-execute(#("w" 0 1 (ex-index 1)))
  #<subr evil-ex>(nil)
  apply(#<subr evil-ex> nil)
  evil-ex(nil)
  funcall-interactively(evil-ex nil)
  command-execute(evil-ex)

Describe your attempts to resolve the issue

• I open an issue to org-transclusion github : Hanging after hit save (:w) with emacs 28 nobiot/org-transclusion#109
• I try to run with doom sandbox vanilla emacs, with emacs-28, and i don't have the error
• I try to !pin 4e952d6be06ea2c993db64a0536d7ad4726670e0 with older version of org in package.el (9.5 at https://git.savannah.gnu.org/cgit/emacs/org-mode.git/tag/?h=release_9.5 ), but i have error at doom sync and org-mode rebuild.

Edit (see comments bottom) : it seems this is not specifically linked to org-transclusion, but a problem with org encrypt or org cache.

Steps to reproduce

1. Installation of org-transclude from melpa (package.el)

(package! org-transclusion)

1. Create a myfile.org with

#+name: prepare-secrets
#+header: :var FILE=""
#+begin_src sh :noweb yes :exports result
if [ -f "$FILE" ]; then
    echo "$FILE already exist"
else
    publicKey="/home/xxx/xxx.asc"
    dd if=/dev/urandom bs=1024 count=4 | base64 --wrap=0 | gpg --batch --recipient-file $publicKey -o xxx.asc -a --encrypt --yes
fi
#+end_src

2. Create another file main.org with transclude activated (M-X org-transclusion-mode) :

#+transclude: [[file:myfile.org][server_script.org]] 

#+CALL: prepare-secrets(FILE="/home/reyman/.password-store/nixos/miskatonic/luks-miskatonic-keyfile.asc")

3. Call org-babel (M-X org-babel-execute-buffer)

4. Hit :w

System Information

https://pastebin.com/D4GA9xHE

[oatmealm]

This might be related, I'm also using org-transclusion, but problem persisted after disabling it. Doom takes couple of minutes to load, often the GUI says it's not responsive. Had to use this:

pkill -SIGUSR2 -i emacs ; emacsclient -e '(setq debug-on-quit nil)'

* substitute-command-keys("Quit")
  mapc(#f(compiled-function (elt) #<bytecode 0x1fb280f9cdb1d5a3>) ((:variable (org-element--headline-cache org-element--cache) :persist-file "ca/ab8390-c391-45f0-a6d2-dc61ad7..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d0/ceb3a2-f37d-485a-9e64-b081645..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bc/8ce86e-ebc0-4c16-a8f4-22d0f8a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "c7/4828c1-b513-49c4-b712-3b8d99d..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "e8/29f3a4-02c6-41ed-ac13-21b4e33..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "0d/df174d-3032-4eb2-9bf7-b140574..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "8e/7b6494-3f8e-432f-ad23-e6e318a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "4e/2e82ca-2046-4d7e-ae47-ba3a209..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "88/bf94f2-fc2c-4b0a-aff0-3871ca4..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "32/5e71a7-3491-4eda-99f8-099ca98..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "29/f16ee6-d420-4cd6-b2b9-ac847a3..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "de/de5593-dd36-4403-a7cb-4a80359..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "af/75c085-9fb7-430a-8921-16b4dc6..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "2e/a65688-31f5-4bd7-b8b6-ddce8ac..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bb/f5e13d-3cf1-45c1-85fa-19f0e76..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "db/f7476f-4e8e-446d-8deb-71ee82f..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "3c/f1465c-9621-4c35-b693-694ae07..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "05/eb4787-a16b-4f58-9a92-d2b0422..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "96/30fe4c-9ddc-44e2-8868-1922cfd..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "61/72b9ae-4c38-44b3-8f1d-fe7f7bc..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "e7/38cfed-5ebb-4059-8d09-13f5525..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "9e/74ee8c-0c5d-4e2b-ac92-fb817a5..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d8/5c8e41-984a-475f-a9c4-d5ee93f..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d4/d0cbbd-4846-4f88-973f-c8653b4..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "c1/652fee-9e73-4b60-bb27-1e75a5a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "4a/a96e7b-57ea-4998-81b0-4f6c627..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "47/a3975b-d3f9-44a2-b64f-7699925..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "43/b6ff74-fcc5-444d-8160-305f27a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "09/ca3811-490a-45ba-a181-89414cb..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bd/85372b-dd55-4825-93c3-9835d2a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "a7/8c1ce4-91b8-4a7f-aa04-e2c382e..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "79/ea1d81-2c2e-409b-a44d-0bacaad..." :path nil :inode nil :hash nil) ...))
  seq-do(#f(compiled-function (elt) #<bytecode 0x1fb280f9cdb1d5a3>) ((:variable (org-element--headline-cache org-element--cache) :persist-file "ca/ab8390-c391-45f0-a6d2-dc61ad7..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d0/ceb3a2-f37d-485a-9e64-b081645..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bc/8ce86e-ebc0-4c16-a8f4-22d0f8a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "c7/4828c1-b513-49c4-b712-3b8d99d..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "e8/29f3a4-02c6-41ed-ac13-21b4e33..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "0d/df174d-3032-4eb2-9bf7-b140574..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "8e/7b6494-3f8e-432f-ad23-e6e318a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "4e/2e82ca-2046-4d7e-ae47-ba3a209..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "88/bf94f2-fc2c-4b0a-aff0-3871ca4..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "32/5e71a7-3491-4eda-99f8-099ca98..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "29/f16ee6-d420-4cd6-b2b9-ac847a3..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "de/de5593-dd36-4403-a7cb-4a80359..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "af/75c085-9fb7-430a-8921-16b4dc6..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "2e/a65688-31f5-4bd7-b8b6-ddce8ac..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bb/f5e13d-3cf1-45c1-85fa-19f0e76..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "db/f7476f-4e8e-446d-8deb-71ee82f..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "3c/f1465c-9621-4c35-b693-694ae07..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "05/eb4787-a16b-4f58-9a92-d2b0422..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "96/30fe4c-9ddc-44e2-8868-1922cfd..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "61/72b9ae-4c38-44b3-8f1d-fe7f7bc..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "e7/38cfed-5ebb-4059-8d09-13f5525..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "9e/74ee8c-0c5d-4e2b-ac92-fb817a5..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d8/5c8e41-984a-475f-a9c4-d5ee93f..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d4/d0cbbd-4846-4f88-973f-c8653b4..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "c1/652fee-9e73-4b60-bb27-1e75a5a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "4a/a96e7b-57ea-4998-81b0-4f6c627..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "47/a3975b-d3f9-44a2-b64f-7699925..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "43/b6ff74-fcc5-444d-8160-305f27a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "09/ca3811-490a-45ba-a181-89414cb..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bd/85372b-dd55-4825-93c3-9835d2a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "a7/8c1ce4-91b8-4a7f-aa04-e2c382e..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "79/ea1d81-2c2e-409b-a44d-0bacaad..." :path nil :inode nil :hash nil) ...))
  seq-find(#f(compiled-function (plist) #<bytecode 0x1b028a5ced84b312>) ((:variable (org-element--headline-cache org-element--cache) :persist-file "ca/ab8390-c391-45f0-a6d2-dc61ad7..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d0/ceb3a2-f37d-485a-9e64-b081645..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bc/8ce86e-ebc0-4c16-a8f4-22d0f8a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "c7/4828c1-b513-49c4-b712-3b8d99d..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "e8/29f3a4-02c6-41ed-ac13-21b4e33..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "0d/df174d-3032-4eb2-9bf7-b140574..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "8e/7b6494-3f8e-432f-ad23-e6e318a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "4e/2e82ca-2046-4d7e-ae47-ba3a209..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "88/bf94f2-fc2c-4b0a-aff0-3871ca4..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "32/5e71a7-3491-4eda-99f8-099ca98..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "29/f16ee6-d420-4cd6-b2b9-ac847a3..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "de/de5593-dd36-4403-a7cb-4a80359..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "af/75c085-9fb7-430a-8921-16b4dc6..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "2e/a65688-31f5-4bd7-b8b6-ddce8ac..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bb/f5e13d-3cf1-45c1-85fa-19f0e76..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "db/f7476f-4e8e-446d-8deb-71ee82f..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "3c/f1465c-9621-4c35-b693-694ae07..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "05/eb4787-a16b-4f58-9a92-d2b0422..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "96/30fe4c-9ddc-44e2-8868-1922cfd..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "61/72b9ae-4c38-44b3-8f1d-fe7f7bc..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "e7/38cfed-5ebb-4059-8d09-13f5525..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "9e/74ee8c-0c5d-4e2b-ac92-fb817a5..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d8/5c8e41-984a-475f-a9c4-d5ee93f..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "d4/d0cbbd-4846-4f88-973f-c8653b4..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "c1/652fee-9e73-4b60-bb27-1e75a5a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "4a/a96e7b-57ea-4998-81b0-4f6c627..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "47/a3975b-d3f9-44a2-b64f-7699925..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "43/b6ff74-fcc5-444d-8160-305f27a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "09/ca3811-490a-45ba-a181-89414cb..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "bd/85372b-dd55-4825-93c3-9835d2a..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "a7/8c1ce4-91b8-4a7f-aa04-e2c382e..." :path nil :inode nil :hash nil) (:variable (org-element--headline-cache org-element--cache) :persist-file "79/ea1d81-2c2e-409b-a44d-0bacaad..." :path nil :inode nil :hash nil) ...))
  org-persist--get-index((org-element--headline-cache org-element--cache) nil)
  org-persist-read((org-element--headline-cache org-element--cache) nil)
  org-persist-read-all()
  funcall(org-persist-read-all)
  (condition-case e (funcall hook) ((debug error) (signal 'doom-hook-error (list hook e))))
  doom-run-hook(org-persist-read-all)
  run-hook-wrapped(doom-run-hook org-persist-read-all)
  (condition-case e (run-hook-wrapped hook #'doom-run-hook) ((debug doom-hook-error) (if debug-on-error nil (lwarn hook :error "Error running hook %S because: %s" (if (symbolp (car (cdr e))) (symbol-name (car (cdr e))) (car (cdr e))) (car (cdr (cdr e))))) (signal 'doom-hook-error (cons hook (cdr e)))))
  (let ((hook (car --dolist-tail--))) (condition-case e (run-hook-wrapped hook #'doom-run-hook) ((debug doom-hook-error) (if debug-on-error nil (lwarn hook :error "Error running hook %S because: %s" (if (symbolp (car ...)) (symbol-name (car ...)) (car (cdr e))) (car (cdr (cdr e))))) (signal 'doom-hook-error (cons hook (cdr e))))) (setq --dolist-tail-- (cdr --dolist-tail--)))
  (while --dolist-tail-- (let ((hook (car --dolist-tail--))) (condition-case e (run-hook-wrapped hook #'doom-run-hook) ((debug doom-hook-error) (if debug-on-error nil (lwarn hook :error "Error running hook %S because: %s" (if (symbolp ...) (symbol-name ...) (car ...)) (car (cdr ...)))) (signal 'doom-hook-error (cons hook (cdr e))))) (setq --dolist-tail-- (cdr --dolist-tail--))))
  (let ((--dolist-tail-- hooks)) (while --dolist-tail-- (let ((hook (car --dolist-tail--))) (condition-case e (run-hook-wrapped hook #'doom-run-hook) ((debug doom-hook-error) (if debug-on-error nil (lwarn hook :error "Error running hook %S because: %s" (if ... ... ...) (car ...))) (signal 'doom-hook-error (cons hook (cdr e))))) (setq --dolist-tail-- (cdr --dolist-tail--)))))
  doom-run-hooks(after-init-hook delayed-warnings-hook)
  apply(doom-run-hooks (after-init-hook delayed-warnings-hook))
  run-hooks(after-init-hook delayed-warnings-hook)
  command-line()
  normal-top-level()

[nobiot]

@reyman @kishvanchee
On Doom with Org v9.6, can you not simply remove-hook that Doom adds here?

https://github.com/hlissner/doom-emacs/blob/af7c1d79bd63d78410aafc410d52ee5c1109ec26/modules/lang/org/config.el#L1060

In both of your error stack, Org-encrypt-entries seems to be the offending function.

doom-run-hook(org-encrypt-entries)

[oatmealm]

@nobiot I'm seeing this error when I start emacs... it now takes minutes sometimes, saving seems ok.

[nobiot]

@oatmealm I don't know which errors you are referring to (there is one @reyman originally reported, and the other one you reported) but either way, I don't think I can be of much help. As far as I could see neither of the backtrace contains org-transclusion in them. I don't use Doom.

[nobiot]

I also tried Doom to test Org-transclusion with Org v9.6. I didn't have this issue of long startup time on my Ubuntu Linux.

[reyman]

@nobiot You'right, it seems this is not a problem with transclusion at all, i remove this to the title. @oatmealm look at here, other people have the same problem, linked to org cache or encrypt, there is some investigation : kaushalmodi/ox-hugo#487