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[10:01:14] Looking for 'tbl2asn' - found /rds/bear-apps/2019b/EL8-has/software/prokka/1.14.5-gompi-2019b/bin/../binaries/linux/tbl2asn
tbl2asn: error while loading shared libraries: libidn.so.11: cannot open shared object file: No such file or directory
[10:01:14] Could not determine version of tbl2asn - please install version 24.3 or higher
I hacked a fix inside out install of prokka:
# tbl2asn expects libidn.so.11 and the (different) version provided by the libidn seems fine
"mkdir %(installdir)s/lib && cd %(installdir)s/lib && ln -s $EBROOTLIBIDN/lib/libidn.so libidn.so.11",
# replace tbl2asn with a newer version
"chmod +x %(installdir)s/tbl2asn && mv %(installdir)s/tbl2asn %(installdir)s/binaries/linux/tbl2asn",
Alternative, is to build from source:
wget https://ftp.ncbi.nih.gov/toolbox/ncbi_tools/CURRENT/ncbi.tar.gz
tar xzf ncbi.tar.gz
./ncbi/make/makedis.csh
Obviously that last step should be replaced with just building tbl2asn, as that last step builds lots more and fails to complete.
The text was updated successfully, but these errors were encountered:
This is not the 'tbl2asn expires each year' (#13417), but may fix that.
From #15366 (comment)
I hacked a fix inside out install of prokka:
Alternative, is to build from source:
Obviously that last step should be replaced with just building
tbl2asn
, as that last step builds lots more and fails to complete.The text was updated successfully, but these errors were encountered: