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SciPy-bundle-2023.07-gfbf-2023a.eb fails to build (self test crashes) #18859

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schiotz opened this issue Sep 25, 2023 · 3 comments
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SciPy-bundle-2023.07-gfbf-2023a.eb fails to build (self test crashes) #18859

schiotz opened this issue Sep 25, 2023 · 3 comments
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@schiotz
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schiotz commented Sep 25, 2023

I am trying to build SciPy-bundle-2023.07-gfbf-2023a.eb, it works on the Intel Cascade_Lake Xeon_Gold_6242R but fails on the IceLake Xeon_Gold_6348 with this error in the self-test:

scipy/integrate/tests/test__quad_vec.py::test_quad_vec_pool_args[1-extra_args1] PASSED                                           [ 11%]
scipy/integrate/tests/test__quad_vec.py::test_quad_vec_pool_args[10-2] Fatal Python error: Aborted
@boegel boegel added this to the 4.x milestone Sep 25, 2023
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boegel commented Sep 25, 2023

Hmm, this seems similar to the hard crash in #17539, but it's not a segmentation fault.

Maybe the test suite is consuming a significant amount of memory, and that's triggering the kernel to abort the process because it's running in a Slurm job where only a specific amount of memory is available?

@schiotz
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schiotz commented Sep 26, 2023

I am compiling on a login node, where memory is limited to 50GB per process. Total memory is 500 GB. I really hope that is not too little to build SciPy-bundle. :-)

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schiotz commented Sep 26, 2023

Follow-up: It could very well be related to ressources - building on a compute node in a slurm job worked. Thank you very much, indeed, for pointing me in the right direction.

@schiotz schiotz closed this as completed Sep 26, 2023
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