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Color by pLDDT using Molstar extension (DRAFT) #259

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@prihoda prihoda commented Jun 11, 2023

Fixes #255

Proof of concept of pLDDT coloring directly using Molstar extension

This is just a working prototype for now. Needed to temporarily disable other stories in the storyboard due to typescript errors (at least on my end).

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};

const ViewerAutoPreset = StructureRepresentationPresetProvider({
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@prihoda prihoda Jun 11, 2023

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This is also declared in molstar/lib/apps/viewer/app.ts (https://github.com/molstar/molstar/blob/v3.34.0/src/apps/viewer/app.ts#L484-L510) but I assume we should not import from there but rather redeclare this class here

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prihoda commented Jun 11, 2023

@aurel-l @gustavo-salazar please take a look at the demo. We would need to make sure the initialization is done correctly and that it works consistently, but it works and only minimal code is needed :)

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prihoda commented Jun 11, 2023

image

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Nightingale structure - AlphaFold colouring
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