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DESCRIPTION
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DESCRIPTION
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Package: tcgaViz
Title: Visualization Tool for the Cancer Genome Atlas Program (TCGA)
Version: 1.0.2
Authors@R:
c(person(given = "Etienne",
family = "Camenen",
role = c("aut", "cre"),
email = "etienne.camenen@gmail.com"),
person(given = "Gilles",
family = "Marodon",
role = "aut"),
person(given = "Nicolas",
family = "Aubert",
role = "aut"))
Description: Differential analysis of tumor tissue immune cell type
abundance based on RNA-seq gene-level expression from The Cancer
Genome Atlas (TCGA; <https://pancanatlas.xenahubs.net>) database.
License: GPL-3
Depends:
R (>= 4.0.0)
Imports:
config,
data.table,
dplyr,
DT,
ggplot2,
ggpubr,
golem,
grDevices,
magrittr,
methods,
plotly,
readr,
reshape2,
rlang,
rstatix,
scales,
shiny,
shinyFeedback,
shinyjs,
stats,
stringr,
tidyr,
tidyselect,
utils
Suggests:
covr,
knitr,
rmarkdown,
spelling,
testthat
VignetteBuilder:
knitr
Encoding: UTF-8
Language: en-US
LazyData: false
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2