"combine_pathfindR_results" function giving reverse up/down-regulation

[rekren]

Hello Ege!

First of all, thanks a lot for this fantastic versatile gene enrichment tool.

Lately I am extensively using pathfindR and I have noticed one small issue about combine_pathfindR_results function.

When one gene is upregulated in "pathfindR_results_A" or "pathfindR_results_B" it has seen as downregulated in the combined results plot of combined_results_graph(node_size = "p_val",combine_pathfindR_results(result_A = pathfindR_results_A, result_B = pathfindR_results_B,use_description = T))

I hope you can fix that tiny problem,

Have a nice week,
Best wishes,
-R