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hmm scan bug? #49

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yloemie opened this issue May 10, 2017 · 1 comment
Closed

hmm scan bug? #49

yloemie opened this issue May 10, 2017 · 1 comment

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@yloemie
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yloemie commented May 10, 2017

Hi,
I have just installed the last version.
I have an error while trying to run the example (./emapper.py -i test/polb.fa --output polb_viruses -d viruses) :
"Error: Unrecognized format, trying to open hmm file /eggnog-mapper-0.99.2/data/hmmdb_levels/viruses_hmm/viruses_hmm.all_hmm for reading."
I have tried to run hmmscan by myself with the downloaded files and it works.
I don't find where this error is produced, this error message doesn't come from emapper.py...

Do you have any clue?

Best,

Yann

@yloemie
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yloemie commented May 19, 2017

Hi,
sorry for the previous post. I have found hmmer binaries in my path and that was an old version from 2010. I have removed it and it works fine.
Thanks,
best,

Yann

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