Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Term-mappings can not be saved in name via FLAT #1194

Closed
2 tasks done
stefanspiska opened this issue Sep 19, 2023 · 0 comments · Fixed by ehrbase/openEHR_SDK#519
Closed
2 tasks done

Term-mappings can not be saved in name via FLAT #1194

stefanspiska opened this issue Sep 19, 2023 · 0 comments · Fixed by ehrbase/openEHR_SDK#519
Labels
bug Something isn't working

Comments

@stefanspiska
Copy link
Contributor

Before reporting an issue

  • I have searched existing issues
  • I have reproduced the issue with the latest release

Environment information

{
"ehrbase_version": "0.31.0-SNAPSHOT",
"openehr_sdk_version": "2.3.0-SNAPSHOT",
"archie_version": "3.3.0",
"jvm_version": "Azul Systems, Inc. 17.0.3+7-LTS",
"os_version": "Windows 10 amd64 10.0",
"postgres_version": "PostgreSQL 13.4 on x86_64-pc-linux-musl, compiled by gcc (Alpine 10.3.1_git20210424) 10.3.1 20210424, 64-bit"
}

Steps to reproduce

For template https://github.com/ehrbase/openEHR_SDK/blob/develop/test-data/src/main/resources/operationaltemplate/conformance_ehrbase.de.v0.opt

Save

{
	"_type": "COMPOSITION",
	"name": {
		"_type": "DV_TEXT",
		"value": "conformance"},
	"archetype_details": {
		"archetype_id": {
			"value": "openEHR-EHR-COMPOSITION.conformance_composition_.v0"
		},
		"template_id": {
			"value": "conformance-ehrbase.de.v0"
		},
		"rm_version": "1.0.4"
	},
	"language": {
		"_type": "CODE_PHRASE",
		"terminology_id": {
			"_type": "TERMINOLOGY_ID",
			"value": "ISO_639-1"
		},
		"code_string": "en"
	},
	"territory": {
		"_type": "CODE_PHRASE",
		"terminology_id": {
			"_type": "TERMINOLOGY_ID",
			"value": "ISO_3166-1"
		},
		"code_string": "US"
	},
	"category": {
		"_type": "DV_CODED_TEXT",
		"value": "event",
		"defining_code": {
			"_type": "CODE_PHRASE",
			"terminology_id": {
				"_type": "TERMINOLOGY_ID",
				"value": "openehr"
			},
			"code_string": "433"
		}
	},
	"composer": {
		"_type": "PARTY_IDENTIFIED",
		"external_ref": {
			"_type": "PARTY_REF",
			"namespace": "EHR.NETWORK",
			"type": "PARTY",
			"id": {
				"_type": "GENERIC_ID",
				"value": "1234-5678",
				"scheme": "UUID"
			}
		},
		"name": "Silvia Blake"
	},
	"context": {
		"_type": "EVENT_CONTEXT",
		"start_time": {
			"_type": "DV_DATE_TIME",
			"value": "2021-12-21T14:19:31.649613+01:00"
		},
		"end_time": {
			"_type": "DV_DATE_TIME",
			"value": "2021-12-21T15:19:31.649613+01:00"
		},
		"location": "microbiology lab 2",
		"setting": {
			"_type": "DV_CODED_TEXT",
			"value": "other care",
			"defining_code": {
				"_type": "CODE_PHRASE",
				"terminology_id": {
					"_type": "TERMINOLOGY_ID",
					"value": "openehr"
				},
				"code_string": "238"
			}
		},
		"health_care_facility": {
			"_type": "PARTY_IDENTIFIED",
			"external_ref": {
				"_type": "PARTY_REF",
				"namespace": "HOSPITAL-NS",
				"type": "PARTY",
				"id": {
					"_type": "GENERIC_ID",
					"value": "9091",
					"scheme": "HOSPITAL-NS"
				}
			},
			"name": "Hospital"
		},
		"participations": [
			{
				"_type": "PARTICIPATION",
				"function": {
					"_type": "DV_TEXT",
					"value": "requester"
				},
				"mode": {
					"_type": "DV_CODED_TEXT",
					"value": "face-to-face communication",
					"defining_code": {
						"_type": "CODE_PHRASE",
						"terminology_id": {
							"_type": "TERMINOLOGY_ID",
							"value": "openehr"
						},
						"code_string": "216"
					}
				},
				"performer": {
					"_type": "PARTY_IDENTIFIED",
					"external_ref": {
						"_type": "PARTY_REF",
						"namespace": "HOSPITAL-NS",
						"type": "PARTY",
						"id": {
							"_type": "GENERIC_ID",
							"value": "199",
							"scheme": "HOSPITAL-NS"
						}
					},
					"name": "Dr. Marcus Johnson"
				}
			}
		]
	},
	"content": [
		{
			"_type": "SECTION",
			"name": {
				"_type": "DV_TEXT",
				"value": "conformance section"
			},
			"archetype_details": {
				"archetype_id": {
					"value": "openEHR-EHR-SECTION.conformance_section.v0"
				},
				"template_id": {
					"value": "conformance-ehrbase.de.v0"
				},
				"rm_version": "1.0.4"
			},
			"items": [
				{
					"_type": "OBSERVATION",
					"name": {
						"_type": "DV_TEXT",
						"value": "test",
						"mappings": [
							{
								"_type": "TERM_MAPPING",
								"match": "=",
								"target": {
									"_type": "CODE_PHRASE",
									"terminology_id": {
										"_type": "TERMINOLOGY_ID",
										"value": "SNOMED-CT"
									},
									"code_string": "21794005"
								},
								"purpose": {
									"_type": "DV_CODED_TEXT",
									"value": "research study",
									"defining_code": {
										"_type": "CODE_PHRASE",
										"terminology_id": {
											"_type": "TERMINOLOGY_ID",
											"value": "openehr"
										},
										"code_string": "671"
									}
								}
							}
						]
					},
					"archetype_details": {
						"archetype_id": {
							"value": "openEHR-EHR-OBSERVATION.conformance_observation.v0"
						},
						"template_id": {
							"value": "conformance-ehrbase.de.v0"
						},
						"rm_version": "1.0.4"
					},
					"language": {
						"_type": "CODE_PHRASE",
						"terminology_id": {
							"_type": "TERMINOLOGY_ID",
							"value": "ISO_639-1"
						},
						"code_string": "en"
					},
					"encoding": {
						"_type": "CODE_PHRASE",
						"terminology_id": {
							"_type": "TERMINOLOGY_ID",
							"value": "IANA_character-sets"
						},
						"code_string": "UTF-8"
					},
					"workflow_id": {
						"_type": "OBJECT_REF",
						"namespace": "HOSPITAL-NS",
						"type": "WORKFLOW",
						"id": {
							"_type": "GENERIC_ID",
							"value": "335645",
							"scheme": "HOSPITAL-NS"
						}
					},
					"subject": {
						"_type": "PARTY_SELF"
					},
					"other_participations": [
						{
							"_type": "PARTICIPATION",
							"function": {
								"_type": "DV_TEXT",
								"value": "requester"
							},
							"mode": {
								"_type": "DV_CODED_TEXT",
								"value": "face-to-face communication",
								"defining_code": {
									"_type": "CODE_PHRASE",
									"terminology_id": {
										"_type": "TERMINOLOGY_ID",
										"value": "openehr"
									},
									"code_string": "216"
								}
							},
							"performer": {
								"_type": "PARTY_IDENTIFIED",
								"external_ref": {
									"_type": "PARTY_REF",
									"namespace": "HOSPITAL-NS",
									"type": "PARTY",
									"id": {
										"_type": "GENERIC_ID",
										"value": "199",
										"scheme": "HOSPITAL-NS"
									}
								},
								"name": "Dr. Marcus Johnson"
							}
						},
						{
							"_type": "PARTICIPATION",
							"function": {
								"_type": "DV_TEXT",
								"value": "performer"
							},
							"mode": {
								"_type": "DV_CODED_TEXT",
								"value": "not specified",
								"defining_code": {
									"_type": "CODE_PHRASE",
									"terminology_id": {
										"_type": "TERMINOLOGY_ID",
										"value": "openehr"
									},
									"code_string": "193"
								}
							},
							"performer": {
								"_type": "PARTY_IDENTIFIED",
								"external_ref": {
									"_type": "PARTY_REF",
									"namespace": "HOSPITAL-NS",
									"type": "PARTY",
									"id": {
										"_type": "GENERIC_ID",
										"value": "198",
										"scheme": "HOSPITAL-NS"
									}
								},
								"name": "Lara Markham"
							}
						}
					],
					"protocol": {
						"_type": "ITEM_TREE",
						"name": {
							"_type": "DV_TEXT",
							"value": "Item tree"
						},
						"items": [
							{
								"_type": "ELEMENT",
								"name": {
									"_type": "DV_TEXT",
									"value": "DV_TEXT"
								},
								"value": {
									"_type": "DV_TEXT",
									"value": "Lorem ipsum"
								},
								"archetype_node_id": "at0021"
							}
						],
						"archetype_node_id": "at0020"
					},
					"guideline_id": {
						"_type": "OBJECT_REF",
						"namespace": "HOSPITAL-NS",
						"type": "GUIDELINE",
						"id": {
							"_type": "GENERIC_ID",
							"value": "3445",
							"scheme": "HOSPITAL-NS"
						}
					},
					"data": {
						"name": {
							"_type": "DV_TEXT",
							"value": "History"
						},
						"origin": {
							"_type": "DV_DATE_TIME",
							"value": "2022-02-03T04:05:06"
						},
						"events": [
							{
								"_type": "INTERVAL_EVENT",
								"name": {
									"_type": "DV_TEXT",
									"value": "Any event"
								},
								"time": {
									"_type": "DV_DATE_TIME",
									"value": "2022-02-03T04:05:06"
								},
								"state": {
									"_type": "ITEM_TREE",
									"name": {
										"_type": "DV_TEXT",
										"value": "Item tree"
									},
									"items": [
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TEXT_State"
											},
											"value": {
												"_type": "DV_TEXT",
												"value": "Lorem ipsum"
											},
											"archetype_node_id": "at0031"
										}
									],
									"archetype_node_id": "at0029"
								},
								"data": {
									"_type": "ITEM_TREE",
									"name": {
										"_type": "DV_TEXT",
										"value": "Tree"
									},
									"items": [
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TEXT"
											},
											"value": {
												"_type": "DV_TEXT",
												"value": "Lorem ipsum",
												"mappings": [
													{
														"_type": "TERM_MAPPING",
														"match": "=",
														"target": {
															"_type": "CODE_PHRASE",
															"terminology_id": {
																"_type": "TERMINOLOGY_ID",
																"value": "SNOMED-CT"
															},
															"code_string": "21794005"
														}
													},
													{
														"_type": "TERM_MAPPING",
														"match": ">",
														"target": {
															"_type": "CODE_PHRASE",
															"terminology_id": {
																"_type": "TERMINOLOGY_ID",
																"value": "SNOMED-CT"
															},
															"code_string": "21794000"
														}
													}
												]
											},
											"archetype_node_id": "at0004"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_CODED_TEXT"
											},
											"value": {
												"_type": "DV_CODED_TEXT",
												"value": "term1",
												"defining_code": {
													"_type": "CODE_PHRASE",
													"terminology_id": {
														"_type": "TERMINOLOGY_ID",
														"value": "local"
													},
													"code_string": "at0006"
												}
											},
											"archetype_node_id": "at0005"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_QUANTITY"
											},
											"null_flavour": {
												"_type": "DV_CODED_TEXT",
												"value": "unknown",
												"defining_code": {
													"_type": "CODE_PHRASE",
													"terminology_id": {
														"_type": "TERMINOLOGY_ID",
														"value": "openehr"
													},
													"code_string": "253"
												}
											},
											"null_reason": {
												"_type": "DV_TEXT",
												"value": "sample reason"
											},
											"archetype_node_id": "at0008"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_PROPORTION"
											},
											"value": {
												"_type": "DV_PROPORTION",
												"numerator": 42.0,
												"denominator": 3.0,
												"type": 3
											},
											"archetype_node_id": "at0009"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_COUNT"
											},
											"value": {
												"_type": "DV_COUNT",
												"magnitude": 42
											},
											"archetype_node_id": "at0010"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DATE_TIME"
											},
											"value": {
												"_type": "DV_DATE_TIME",
												"value": "2022-02-03T04:05:06"
											},
											"archetype_node_id": "at0011"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TIME"
											},
											"value": {
												"_type": "DV_TIME",
												"value": "04:05:06"
											},
											"archetype_node_id": "at0012"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DATE"
											},
											"value": {
												"_type": "DV_DATE",
												"value": "2022-02-03"
											},
											"archetype_node_id": "at0013"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_ORDINAL"
											},
											"value": {
												"_type": "DV_ORDINAL",
												"symbol": {
													"_type": "DV_CODED_TEXT",
													"value": "value1",
													"defining_code": {
														"_type": "CODE_PHRASE",
														"terminology_id": {
															"_type": "TERMINOLOGY_ID",
															"value": "local"
														},
														"code_string": "at0015"
													}
												},
												"value": 1
											},
											"archetype_node_id": "at0014"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_BOOLEAN"
											},
											"value": {
												"_type": "DV_BOOLEAN",
												"value": true
											},
											"archetype_node_id": "at0017"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DURATION"
											},
											"value": {
												"_type": "DV_DURATION",
												"value": "PT0S"
											},
											"archetype_node_id": "at0018"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_IDENTIFIER"
											},
											"value": {
												"_type": "DV_IDENTIFIER",
												"id": "dev/null"
											},
											"archetype_node_id": "at0019"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_ehr_uri"
											},
											"value": {
												"_type": "DV_EHR_URI",
												"value": "ehr:/."
											},
											"archetype_node_id": "at0025"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_multimedia"
											},
											"value": {
												"_type": "DV_MULTIMEDIA",
												"uri": {
													"_type": "DV_URI",
													"value": "https://www.example.com/sample"
												},
												"media_type": {
													"_type": "CODE_PHRASE",
													"terminology_id": {
														"_type": "TERMINOLOGY_ID",
														"value": "IANA_media-types"
													},
													"code_string": "video/H261"
												},
												"size": 504903212
											},
											"archetype_node_id": "at0026"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_parsable"
											},
											"value": {
												"_type": "DV_PARSABLE",
												"value": "<!DOCTYPE html><html lang=\"en\"><head><meta charset=\"UTF-8\"><title>Hello World</title></head><body>Hello World!</body></html>",
												"formalism": "text/html"
											},
											"archetype_node_id": "at0027"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_uri"
											},
											"value": {
												"_type": "DV_URI",
												"value": "https://www.example.com/sample"
											},
											"archetype_node_id": "at0028"
										},
										{
											"_type": "CLUSTER",
											"name": {
												"_type": "DV_TEXT",
												"value": "conformance cluster"
											},
											"items": [
												{
													"_type": "ELEMENT",
													"name": {
														"_type": "DV_TEXT",
														"value": "labresult"
													},
													"value": {
														"_type": "DV_TEXT",
														"value": "Lorem ipsum"
													},
													"archetype_node_id": "at0003"
												},
												{
													"_type": "ELEMENT",
													"name": {
														"_type": "DV_TEXT",
														"value": "comment"
													},
													"value": {
														"_type": "DV_TEXT",
														"value": "Lorem ipsum"
													},
													"archetype_node_id": "at0004"
												},
												{
													"_type": "ELEMENT",
													"name": {
														"_type": "DV_TEXT",
														"value": "ANY"
													},
													"value": {
														"_type": "DV_TEXT",
														"value": "Lorem ipsum"
													},
													"archetype_node_id": "at0005"
												}
											],
											"archetype_node_id": "openEHR-EHR-CLUSTER.conformance_cluster.v0"
										}
									],
									"archetype_node_id": "at0003"
								},
								"width": {
									"_type": "DV_DURATION",
									"value": "P30D"
								},
								"sample_count": 5,
								"math_function": {
									"_type": "DV_CODED_TEXT",
									"value": "mean",
									"defining_code": {
										"_type": "CODE_PHRASE",
										"terminology_id": {
											"_type": "TERMINOLOGY_ID",
											"value": "openehr"
										},
										"code_string": "146"
									}
								},
								"archetype_node_id": "at0002"
							},
							{
								"_type": "POINT_EVENT",
								"name": {
									"_type": "DV_TEXT",
									"value": "Any event"
								},
								"time": {
									"_type": "DV_DATE_TIME",
									"value": "2022-02-03T04:05:06"
								},
								"state": {
									"_type": "ITEM_TREE",
									"name": {
										"_type": "DV_TEXT",
										"value": "Item tree"
									},
									"items": [
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TEXT_State"
											},
											"value": {
												"_type": "DV_TEXT",
												"value": "Lorem ipsum"
											},
											"archetype_node_id": "at0031"
										}
									],
									"archetype_node_id": "at0029"
								},
								"data": {
									"_type": "ITEM_TREE",
									"name": {
										"_type": "DV_TEXT",
										"value": "Tree"
									},
									"items": [
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TEXT"
											},
											"value": {
												"_type": "DV_TEXT",
												"value": "Lorem ipsum"
											},
											"archetype_node_id": "at0004"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_CODED_TEXT"
											},
											"value": {
												"_type": "DV_CODED_TEXT",
												"value": "term1",
												"defining_code": {
													"_type": "CODE_PHRASE",
													"terminology_id": {
														"_type": "TERMINOLOGY_ID",
														"value": "local"
													},
													"code_string": "at0006"
												}
											},
											"archetype_node_id": "at0005"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_QUANTITY"
											},
											"value": {
												"_type": "DV_QUANTITY",
												"units": "mm",
												"magnitude": 22.0
											},
											"archetype_node_id": "at0008"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_PROPORTION"
											},
											"value": {
												"_type": "DV_PROPORTION",
												"numerator": 42.0,
												"denominator": 3.0,
												"type": 3
											},
											"archetype_node_id": "at0009"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_COUNT"
											},
											"value": {
												"_type": "DV_COUNT",
												"magnitude": 42
											},
											"archetype_node_id": "at0010"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DATE_TIME"
											},
											"value": {
												"_type": "DV_DATE_TIME",
												"value": "2022-02-03T04:05:06"
											},
											"archetype_node_id": "at0011"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TIME"
											},
											"value": {
												"_type": "DV_TIME",
												"value": "04:05:06"
											},
											"archetype_node_id": "at0012"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DATE"
											},
											"value": {
												"_type": "DV_DATE",
												"value": "2022-02-03"
											},
											"archetype_node_id": "at0013"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_ORDINAL"
											},
											"value": {
												"_type": "DV_ORDINAL",
												"symbol": {
													"_type": "DV_CODED_TEXT",
													"value": "value1",
													"defining_code": {
														"_type": "CODE_PHRASE",
														"terminology_id": {
															"_type": "TERMINOLOGY_ID",
															"value": "local"
														},
														"code_string": "at0015"
													}
												},
												"value": 1
											},
											"archetype_node_id": "at0014"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_BOOLEAN"
											},
											"value": {
												"_type": "DV_BOOLEAN",
												"value": true
											},
											"archetype_node_id": "at0017"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DURATION"
											},
											"value": {
												"_type": "DV_DURATION",
												"value": "PT0S"
											},
											"archetype_node_id": "at0018"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_IDENTIFIER"
											},
											"value": {
												"_type": "DV_IDENTIFIER",
												"id": "dev/null"
											},
											"archetype_node_id": "at0019"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_ehr_uri"
											},
											"value": {
												"_type": "DV_EHR_URI",
												"value": "ehr:/."
											},
											"archetype_node_id": "at0025"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_multimedia"
											},
											"value": {
												"_type": "DV_MULTIMEDIA",
												"uri": {
													"_type": "DV_URI",
													"value": "https://www.example.com/sample"
												},
												"media_type": {
													"_type": "CODE_PHRASE",
													"terminology_id": {
														"_type": "TERMINOLOGY_ID",
														"value": "IANA_media-types"
													},
													"code_string": "video/H261"
												},
												"size": 504903212
											},
											"archetype_node_id": "at0026"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_parsable"
											},
											"value": {
												"_type": "DV_PARSABLE",
												"value": "<!DOCTYPE html><html lang=\"en\"><head><meta charset=\"UTF-8\"><title>Hello World</title></head><body>Hello World!</body></html>",
												"formalism": "text/html"
											},
											"archetype_node_id": "at0027"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_uri"
											},
											"value": {
												"_type": "DV_URI",
												"value": "https://www.example.com/sample"
											},
											"archetype_node_id": "at0028"
										},
										{
											"_type": "CLUSTER",
											"name": {
												"_type": "DV_TEXT",
												"value": "conformance cluster"
											},
											"items": [
												{
													"_type": "ELEMENT",
													"name": {
														"_type": "DV_TEXT",
														"value": "labresult"
													},
													"value": {
														"_type": "DV_TEXT",
														"value": "Lorem ipsum"
													},
													"archetype_node_id": "at0003"
												},
												{
													"_type": "ELEMENT",
													"name": {
														"_type": "DV_TEXT",
														"value": "comment"
													},
													"value": {
														"_type": "DV_TEXT",
														"value": "Lorem ipsum"
													},
													"archetype_node_id": "at0004"
												},
												{
													"_type": "ELEMENT",
													"name": {
														"_type": "DV_TEXT",
														"value": "ANY"
													},
													"value": {
														"_type": "DV_TEXT",
														"value": "Lorem ipsum"
													},
													"archetype_node_id": "at0005"
												}
											],
											"archetype_node_id": "openEHR-EHR-CLUSTER.conformance_cluster.v0"
										}
									],
									"archetype_node_id": "at0003"
								},
								"archetype_node_id": "at0002"
							},
							{
								"_type": "INTERVAL_EVENT",
								"name": {
									"_type": "DV_TEXT",
									"value": "Any event"
								},
								"time": {
									"_type": "DV_DATE_TIME",
									"value": "2022-02-03T04:05:06"
								},
								"state": {
									"_type": "ITEM_TREE",
									"name": {
										"_type": "DV_TEXT",
										"value": "Item tree"
									},
									"items": [
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TEXT_State"
											},
											"value": {
												"_type": "DV_TEXT",
												"value": "Lorem ipsum"
											},
											"archetype_node_id": "at0031"
										}
									],
									"archetype_node_id": "at0029"
								},
								"data": {
									"_type": "ITEM_TREE",
									"name": {
										"_type": "DV_TEXT",
										"value": "Tree"
									},
									"items": [
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TEXT"
											},
											"value": {
												"_type": "DV_TEXT",
												"value": "Lorem ipsum"
											},
											"archetype_node_id": "at0004"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_CODED_TEXT"
											},
											"value": {
												"_type": "DV_CODED_TEXT",
												"value": "term1",
												"defining_code": {
													"_type": "CODE_PHRASE",
													"terminology_id": {
														"_type": "TERMINOLOGY_ID",
														"value": "local"
													},
													"code_string": "at0006"
												}
											},
											"archetype_node_id": "at0005"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_QUANTITY"
											},
											"value": {
												"_type": "DV_QUANTITY",
												"units": "mm",
												"magnitude": 22.0
											},
											"archetype_node_id": "at0008"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_PROPORTION"
											},
											"value": {
												"_type": "DV_PROPORTION",
												"numerator": 42.0,
												"denominator": 3.0,
												"type": 3
											},
											"archetype_node_id": "at0009"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_COUNT"
											},
											"value": {
												"_type": "DV_COUNT",
												"magnitude": 42
											},
											"archetype_node_id": "at0010"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DATE_TIME"
											},
											"value": {
												"_type": "DV_DATE_TIME",
												"value": "2022-02-03T04:05:06"
											},
											"archetype_node_id": "at0011"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_TIME"
											},
											"value": {
												"_type": "DV_TIME",
												"value": "04:05:06"
											},
											"archetype_node_id": "at0012"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DATE"
											},
											"value": {
												"_type": "DV_DATE",
												"value": "2022-02-03"
											},
											"archetype_node_id": "at0013"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_ORDINAL"
											},
											"value": {
												"_type": "DV_ORDINAL",
												"symbol": {
													"_type": "DV_CODED_TEXT",
													"value": "value1",
													"defining_code": {
														"_type": "CODE_PHRASE",
														"terminology_id": {
															"_type": "TERMINOLOGY_ID",
															"value": "local"
														},
														"code_string": "at0015"
													}
												},
												"value": 1
											},
											"archetype_node_id": "at0014"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_BOOLEAN"
											},
											"value": {
												"_type": "DV_BOOLEAN",
												"value": true
											},
											"archetype_node_id": "at0017"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_DURATION"
											},
											"value": {
												"_type": "DV_DURATION",
												"value": "PT0S"
											},
											"archetype_node_id": "at0018"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "DV_IDENTIFIER"
											},
											"value": {
												"_type": "DV_IDENTIFIER",
												"id": "dev/null"
											},
											"archetype_node_id": "at0019"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_ehr_uri"
											},
											"value": {
												"_type": "DV_EHR_URI",
												"value": "ehr:/."
											},
											"archetype_node_id": "at0025"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_multimedia"
											},
											"value": {
												"_type": "DV_MULTIMEDIA",
												"uri": {
													"_type": "DV_URI",
													"value": "https://www.example.com/sample"
												},
												"media_type": {
													"_type": "CODE_PHRASE",
													"terminology_id": {
														"_type": "TERMINOLOGY_ID",
														"value": "IANA_media-types"
													},
													"code_string": "video/H261"
												},
												"size": 504903212
											},
											"archetype_node_id": "at0026"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_parsable"
											},
											"value": {
												"_type": "DV_PARSABLE",
												"value": "<!DOCTYPE html><html lang=\"en\"><head><meta charset=\"UTF-8\"><title>Hello World</title></head><body>Hello World!</body></html>",
												"formalism": "text/html"
											},
											"archetype_node_id": "at0027"
										},
										{
											"_type": "ELEMENT",
											"name": {
												"_type": "DV_TEXT",
												"value": "dv_uri"
											},
											"value": {
												"_type": "DV_URI",
												"value": "https://www.example.com/sample"
											},
											"archetype_node_id": "at0028"
										},
										{
											"_type": "CLUSTER",
											"name": {
												"_type": "DV_TEXT",
												"value": "conformance cluster"
											},
											"archetype_details": {
												"archetype_id": {
													"value": "openEHR-EHR-CLUSTER.conformance_cluster.v0"
												},
												"template_id": {
													"value": "conformance-ehrbase.de.v0"
												},
												"rm_version": "1.0.4"
											},
											"feeder_audit": {
												"_type": "FEEDER_AUDIT",
												"originating_system_item_ids": [
													{
														"_type": "DV_IDENTIFIER",
														"issuer": "issuer1",
														"assigner": "assigner1",
														"id": "id1",
														"type": "PERSON"
													},
													{
														"_type": "DV_IDENTIFIER",
														"issuer": "issuer2",
														"assigner": "assigner2",
														"id": "id2",
														"type": "PERSON"
													}
												],
												"feeder_system_item_ids": [
													{
														"_type": "DV_IDENTIFIER",
														"issuer": "issuer1",
														"assigner": "assigner1",
														"id": "id1",
														"type": "PERSON"
													},
													{
														"_type": "DV_IDENTIFIER",
														"issuer": "issuer2",
														"assigner": "assigner2",
														"id": "id2",
														"type": "PERSON"
													}
												],
												"original_content": {
													"_type": "DV_PARSABLE",
													"value": "Hello world!",
													"formalism": "text/plain"
												},
												"originating_system_audit": {
													"_type": "FEEDER_AUDIT_DETAILS",
													"system_id": "orig",
													"location": {
														"_type": "PARTY_IDENTIFIED",
														"external_ref": {
															"_type": "PARTY_REF",
															"namespace": "uk.org.nmc",
															"type": "PARTY",
															"id": {
																"_type": "GENERIC_ID",
																"value": "12342341",
																"scheme": "NMC"
															}
														},
														"name": "Org 1"
													},
													"provider": {
														"_type": "PARTY_IDENTIFIED",
														"external_ref": {
															"_type": "PARTY_REF",
															"namespace": "uk.org.nmc",
															"type": "PARTY",
															"id": {
																"_type": "GENERIC_ID",
																"value": "456",
																"scheme": "NMC"
															}
														},
														"name": "Per 1"
													},
													"subject": {
														"_type": "PARTY_IDENTIFIED",
														"external_ref": {
															"_type": "PARTY_REF",
															"namespace": "uk.org.nmc",
															"type": "PARTY",
															"id": {
																"_type": "GENERIC_ID",
																"value": "456",
																"scheme": "NMC"
															}
														},
														"name": "Per 1"
													},
													"time": {
														"_type": "DV_DATE_TIME",
														"value": "2021-12-21T16:02:58.0094262+01:00"
													},
													"version_id": "final"
												}
											},
											"items": [
												{
													"_type": "ELEMENT",
													"name": {
														"_type": "DV_TEXT",
														"value": "ANY"
													},
													"value": {
														"_type": "DV_TEXT",
														"value": "Lorem ipsum"
													},
													"archetype_node_id": "at0005"
												}
											],
											"archetype_node_id": "openEHR-EHR-CLUSTER.conformance_cluster.v0",
											"uid": {
												"_type": "HIER_OBJECT_ID",
												"value": "9fcc1c70-9349-444d-b9cb-8fa817697f5e"
											},
											"links": [
												{
													"meaning": {
														"_type": "DV_TEXT",
														"value": "problem related note"
													},
													"type": {
														"_type": "DV_TEXT",
														"value": "problem"
													},
													"target": {
														"_type": "DV_EHR_URI",
														"value": "ehr://ehr.network/347a5490-55ee-4da9-b91a-9bba710f730e"
													}
												}
											]
										}
									],
									"archetype_node_id": "at0003"
								},
								"width": {
									"_type": "DV_DURATION",
									"value": "PT42H"
								},
								"math_function": {
									"_type": "DV_CODED_TEXT",
									"value": "minimum",
									"defining_code": {
										"_type": "CODE_PHRASE",
										"terminology_id": {
											"_type": "TERMINOLOGY_ID",
											"value": "openehr"
										},
										"code_string": "145"
									}
								},
								"archetype_node_id": "at0002"
							}
						],
						"archetype_node_id": "at0001"
					},
					"archetype_node_id": "openEHR-EHR-OBSERVATION.conformance_observation.v0",
					"uid": {
						"_type": "HIER_OBJECT_ID",
						"value": "9fcc1c70-9349-444d-b9cb-8fa817697f5e"
					},
					"links": [
						{
							"meaning": {
								"_type": "DV_TEXT",
								"value": "problem related note"
							},
							"type": {
								"_type": "DV_TEXT",
								"value": "problem"
							},
							"target": {
								"_type": "DV_EHR_URI",
								"value": "ehr://ehr.network/347a5490-55ee-4da9-b91a-9bba710f730e"
							}
						}
					]
				}
			],
			"archetype_node_id": "openEHR-EHR-SECTION.conformance_section.v0",
			"uid": {
				"_type": "HIER_OBJECT_ID",
				"value": "9fcc1c70-9349-444d-b9cb-8fa817697f5e"
			},
			"links": [
				{
					"meaning": {
						"_type": "DV_TEXT",
						"value": "problem related note"
					},
					"type": {
						"_type": "DV_TEXT",
						"value": "problem"
					},
					"target": {
						"_type": "DV_EHR_URI",
						"value": "ehr://ehr.network/347a5490-55ee-4da9-b91a-9bba710f730e"
					}
				}
			]
		}
	],
	"archetype_node_id": "openEHR-EHR-COMPOSITION.conformance_composition_.v0",
	"links": [
		{
			"meaning": {
				"_type": "DV_TEXT",
				"value": "problem related note"
			},
			"type": {
				"_type": "DV_TEXT",
				"value": "problem"
			},
			"target": {
				"_type": "DV_EHR_URI",
				"value": "ehr://ehr.network/347a5490-55ee-4da9-b91a-9bba710f730e"
			}
		}
	]
}

Get the composition via flat. The termmapping in name is there

		"conformance-ehrbase.de.v0/conformance_section/conformance_observation/_name": "test",
		"conformance-ehrbase.de.v0/conformance_section/conformance_observation/_name/_mapping:0/target|terminology": "SNOMED-CT",
		"conformance-ehrbase.de.v0/conformance_section/conformance_observation/_name/_mapping:0/purpose|value": "research study",
		"conformance-ehrbase.de.v0/conformance_section/conformance_observation/_name/_mapping:0|match": "=",
		"conformance-ehrbase.de.v0/conformance_section/conformance_observation/_name/_mapping:0/purpose|code": "671",
		"conformance-ehrbase.de.v0/conformance_section/conformance_observation/_name/_mapping:0/target|code": "21794005",
		"conformance-ehrbase.de.v0/conformance_section/conformance_observation/_name/_mapping:0/purpose|terminology": "openehr",

Try to save the flat representation back as flat

Expected behavior

composition saved

Actual result

{
	"error": "Bad Request",
	"message": "Could not consume Parts [conformance-ehrbase.de.v0/conformance_section/conformance_observation/_mapping:0|match, conformance-ehrbase.de.v0/conformance_section/conformance_observation/_mapping:0/purpose|terminology, conformance-ehrbase.de.v0/conformance_section/conformance_observation/_mapping:0/purpose|value, conformance-ehrbase.de.v0/conformance_section/conformance_observation/_mapping:0/purpose|code, conformance-ehrbase.de.v0/conformance_section/conformance_observation/_mapping:0/target|terminology, conformance-ehrbase.de.v0/conformance_section/conformance_observation/_mapping:0/target|code]"
}

Further information

No response
@stefanspiska stefanspiska added the bug Something isn't working label Sep 19, 2023
@vidi42 vidi42 transferred this issue from ehrbase/ehrbase Oct 4, 2023
@vidi42 vidi42 linked a pull request Oct 4, 2023 that will close this issue
Feature/cdr 1057 term mappings can not be saved in name via flat ehrbase/openEHR_SDK#519
Merged
7 tasks
@vidi42 vidi42 transferred this issue from ehrbase/openEHR_SDK Oct 4, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug Something isn't working
Projects
None yet
Milestone
No milestone
Development

Successfully merging a pull request may close this issue.

Feature/cdr 1057 term mappings can not be saved in name via flat ehrbase/openEHR_SDK
1 participant
@stefanspiska