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CMakeLists.txt
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CMakeLists.txt
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cmake_minimum_required (VERSION 3.11)
## CUSTOMISE
# Define the application name and version.
project (iGenVar VERSION 1.0.0)
## BUILD
# Make Release default build type
if (NOT CMAKE_BUILD_TYPE)
set (CMAKE_BUILD_TYPE Release CACHE STRING
"Choose the type of build, options are: Debug Release Coverage RelWithDebInfo MinSizeRel."
FORCE)
endif ()
# Specify the directories where to store the built archives, libraries and executables
set (CMAKE_ARCHIVE_OUTPUT_DIRECTORY "${CMAKE_BINARY_DIR}/lib")
set (CMAKE_LIBRARY_OUTPUT_DIRECTORY "${CMAKE_BINARY_DIR}/lib")
set (CMAKE_RUNTIME_OUTPUT_DIRECTORY "${CMAKE_BINARY_DIR}/bin")
# Messages
string (ASCII 27 Esc)
set (FontBold "${Esc}[1m")
set (FontReset "${Esc}[m")
# Dependency: SeqAn3.
find_package (SeqAn3 QUIET REQUIRED HINTS lib/seqan3/build_system)
# Use ccache.
include ("${SEQAN3_CLONE_DIR}/test/cmake/seqan3_require_ccache.cmake")
seqan3_require_ccache ()
# Dependency: hclust.
include (FetchContent)
FetchContent_Declare(
hclust
GIT_REPOSITORY https://github.com/cdalitz/hclust-cpp.git
GIT_TAG f902638a3ba1be40ffb6ff6a8ddafba91a150c76
)
FetchContent_Populate(hclust)
add_library ("fastcluster" STATIC ${hclust_SOURCE_DIR}/fastcluster.cpp)
target_include_directories ("fastcluster" PUBLIC ${hclust_SOURCE_DIR})
# Add the application.
add_subdirectory (src)
message (STATUS "${FontBold}You can run `make` to build the application.${FontReset}")
## DOCUMENTATION
add_subdirectory (doc EXCLUDE_FROM_ALL)
## TEST
enable_testing ()
add_subdirectory (test EXCLUDE_FROM_ALL)