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Address user feedback on documentation #59

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sobolevnrm opened this issue May 2, 2020 · 0 comments
Closed
2 of 5 tasks

Address user feedback on documentation #59

sobolevnrm opened this issue May 2, 2020 · 0 comments
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@sobolevnrm

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sobolevnrm commented May 2, 2020 •
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  • Initially, it wasn’t clear if I needed to download or use the website
  • There doesn’t seem to be a link to download the ligand MOL2 for 1HPX or 1ABF. I don’t know if I was supposed to find that somewhere else?
  • I had a pretty hard time following the documentation – I could get it to do the initial PDB2PQR bit, but I couldn’t find the next steps – did I need to use with APBS? Because I did and I couldn’t find information on which setting I needed.
  • Titles on the visualization would be helpful so I know which protein I am looking at
  • Is there a way to visualize solvent accessible channels? Or zoom in on a binding pocket?
@sobolevnrm sobolevnrm transferred this issue from Electrostatics/apbs-pdb2pqr Jul 4, 2020
@sobolevnrm sobolevnrm self-assigned this Aug 30, 2020
@sobolevnrm sobolevnrm mentioned this issue Nov 23, 2020
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