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index.html
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<!DOCTYPE html>
<html ng-app="cttvApp">
<head>
<title ng-bind-template="{{viewTitle ? viewTitle+' - ' : ''}}CTTV Platform"></title>
<meta http-equiv="content-type" content="text/html; charset=UTF8">
<!-- IE9 -->
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<!--[if lte IE 9]>
<script src="bower_components/aight/aight.min.js"></script>
<![endif]-->
<base href="/">
<!--[if IE]><script type="text/javascript">
// Fix for IE ignoring relative base tags.
(function() {
var baseTag = document.getElementsByTagName('base')[0];
baseTag.href = baseTag.href;
})();
</script><![endif]-->
<title ng-bind-template="CTTV Core{{viewTitle ? ' - '+viewTitle : ''}}"></title>
<link href="bower_components/bootstrap/dist/css/bootstrap.min.css" rel="stylesheet" />
<link href="bower_components/components-font-awesome/css/font-awesome.min.css" rel="stylesheet" />
<!-- Components -->
<link href="build/cttv-webapp.css" rel="stylesheet" />
<!-- <link href="node_modules/cttv.bubblesView/build/bubblesView.css" rel="stylesheet" /> -->
<!-- <link href="node_modules/cttv.targetAssociations/build/cttv.targetAssociations.css" rel="stylesheet" /> -->
<!-- <link href="node_modules/cttv.targetGenomeBrowser/build/index.css" rel="stylesheet" /> -->
<!-- <link href="node_modules/cttv.targetTranscriptView/build/index.css" rel="stylesheet" /> -->
<!-- <link href="node_modules/cttv.flowerView/build/flowerView.css" rel="stylesheet"/> -->
<link rel="stylesheet" href="css/app.css">
<!-- <link rel="stylesheet" href="node_modules/tnt.genome/build/index.css"> -->
<!-- IE(9) doesn't create console object if not in debug mode. This makes sure it doesn't throw an exception -->
<script type="text/javascript" src="js/ie_console_noop.js"></script>
<!-- TnT -->
<!-- <script type="text/javascript" src="node_modules/tnt.genome/build/tnt.genome.js"></script> -->
<!-- CTTV Components -->
<!-- <script type="text/javascript" src="node_modules/cttv.bubblesView/build/cttv.bubblesView.js"></script> -->
<!-- <script type="text/javascript" src="node_modules/cttv.api/build/cttv.api.js"></script> -->
<!-- <script type="text/javascript" src="node_modules/cttv.targetAssociations/build/cttv.targetAssociations.js"></script> -->
<!-- <script type="text/javascript" src="node_modules/cttv.targetGenomeBrowser/build/cttv.targetGenomeBrowser.js"></script> -->
<!-- <script type="text/javascript" src="node_modules/cttv.targetTranscriptView/build/cttv.targetTranscriptView.js"></script> -->
<!-- <script type="text/javascript" src="node_modules/cttv.flowerView/build/cttv.flowerView.js"></script> -->
<!-- <script type="text/javascript" src="node_modules/cttv.targetAssociationsTree/build/cttv.targetAssociationsTree.js"></script> -->
<!-- Web components -->
<!-- <script type="text/javascript" src="bower_components/webcomponentsjs/webcomponents.js"></script> -->
<!-- <link rel="import" href="./web_components/cttv/target-evidence/target_evidence.html"> -->
<!-- <link rel="import" href="./web_components/cttv/target-disease-evidence/target-disease-evidence-header/target_disease_evidence_header.html"> -->
<!-- <link rel="import" href="./web_components/cttv/target-disease-evidence/target-disease-evidence-overview/target_disease_evidence_overview.html"> -->
<!-- tables -->
<link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/plug-ins/3cfcc339e89/integration/bootstrap/3/dataTables.bootstrap.css">
<link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/tabletools/2.2.1/css/dataTables.tableTools.min.css">
</head>
<body>
<div class="cttv-main-container">
<!-- Masthead (search) -->
<div class="masthead" ng-show="location.path()!=='/'" ng-controller="MastheadCtrl" ng-cloak>
<div class="container">
<div class="row">
<div class="col-xs-2">
<!-- CTTV logo -->
<a href="/"><img src="imgs/CTTV_logo_webheader.png" width="113px" height="51px"/></a>
</div>
<div class="col-xs-10" ng-controller="SearchBoxCtrl">
<form novalidate="" name="queryForm" class="global-search ng-animate ng-dirty ng-invalid ng-invalid-required ng-valid-minlength" ng-submit="setSearch()">
<fieldset>
<div class="has-feedback search-form">
<!-- Search box + search button -->
<div class="input-group">
<input type="text" placeholder="Search for a target or disease" class="form-control" name="text" tabindex="1" ng-model="search.query.text" ng-model-options="{ debounce: 500 }" autocomplete="off" ng-change="getSuggestions(search.query.text);">
<div class="input-group-btn">
<button type="submit" class="btn btn-primary">
<span class="fa fa-search fa-lg"></span>
</button>
</div>
</div>
<!-- Search in progress spinner -->
<span cttv-progress-spinner class="text-lowlight form-control-feedback search-form-spinner" ng-show="search.progress"></span>
<!-- Suggestions box -->
<div cttv-search-suggestions ng-show="isVisible()" ng-model="search.query.results"></div>
<span class="small">
<i>
Examples: <a href="/search?q=braf">BRAF</a>,
<a href="/search?q=asthma">asthma</a>,
<a href="/search?q=pten">PTEN</a>
</i>
</span>
</div>
</fieldset>
</form>
</div>
</div>
</div>
</div>
<!-- End Masthead -->
<!-- Authentication error -->
<alert type="danger" ng-show="showApiErrorMsg" ng-cloak>Your session has expired, reload the page to authenticate again
<button class="btn btn-default btn-sm" ng-click="reloadPage()">Reload</button>
</alert>
<div class="container">
<div class="cttv-beta-ribbon">BETA</div>
<!-- ie < 9? -->
<!--[if lt IE 9]>
<div class="alert alert-danger">
You are using an <strong>outdated browser</strong> and as a result this page is probably not displayed properly. Please <a href="http://whatbrowser.org/">upgrade your browser</a> in order to access our content properly</p>
</div>
<![endif]-->
<!-- javascript disabled ?-->
<noscript>
<div class="alert alert-danger">
Javasript is currently disabled or is not supported by this browser. This page relies on JavaScript to present the data in all its glory. Please enable JavaScript for full functionality.
</div>
</noscript>
<!-- Content -->
<div ng-view autoscroll="true"></div>
<!-- End Content -->
</div>
</div>
<!-- Footer -->
<div class="footer">
<div class="container">
<div class-"row">
<div class="col-sm-3">
<h6>INFO</h6>
<p>CTTV Core Beta Version 0.7.0</p>
<p><a href="/release-notes">Release notes</a></p>
<p><a href="/about">About</a></p>
</div>
<div class="col-sm-3">
<h6>PARTNERS</h6>
<p><a href="http://www.ebi.ac.uk">EMBL-EBI</a></p>
<p><a href="http://www.sanger.ac.uk">Wellcome Trust Sanger Institute</a></p>
<p><a href="http://www.gsk.com">GSK</a></p>
</div>
<div class="col-sm-3">
<h6>SUPPORT</h6>
<p>
<a href="/faq"><i class="fa fa-question-circle"></i> FAQs</a><br />
<span class="fa fa-envelope"></span> <a href="mailto:support@targetvalidation.org?Subject=CTTV%20Core%20Platform%20-%20help%20request">support<span class="fa fa-at"></span>targetvalidation.org</a></p>
</div>
<div class="col-sm-3">
<h6>CONTACT</h6>
<h6>Centre for Therapeutic Target Validation</h6>
<p>
<span class="fa fa-globe"></span> <a href="http://www.targetvalidation.org">http://www.targetvalidation.org</a><br />
<!-- <span class="fa fa-phone"></span> +44 (0)1223 494 665<br /> -->
<span class="fa fa-twitter"></span> <a href="http://twitter.com/targetvalidate">@targetvalidate</a>
</p>
</div>
</div>
</div>
</div>
<!-- End Footer-->
<script type="text/javascript" src="bower_components/angular/angular.js"></script>
<script type="text/javascript" src="bower_components/angular-route/angular-route.js"></script>
<script type="text/javascript" src="bower_components/angular-bootstrap/ui-bootstrap-tpls.min.js"></script>
<script type="text/javascript" src="bower_components/angulartics/dist/angulartics.min.js"></script>
<script type="text/javascript" src="bower_components/angulartics/dist/angulartics-piwik.min.js"></script>
<script type="text/javascript" src="bower_components/d3/d3.min.js"></script>
<script type="text/javascript" src="bower_components/jquery/dist/jquery.min.js"></script>
<script type="text/javascript" src="vendor/cola/cola.min.js"></script>
<script type="text/javascript" src="js/angularjs-viewhead.js"></script>
<!-- Components -->
<script type="text/javascript" src="build/cttv-webapp.js"></script>
<!-- lodash -->
<script type="text/javascript" src="bower_components/lodash/lodash.min.js"></script>
<!-- PMC Citation -->
<!-- <link type="text/css" rel="stylesheet" href="node_modules/biojs-vis-pmccitation/css/style.css"/> -->
<!-- <script type="text/javascript" src="node_modules/biojs-vis-pmccitation/build/biojsvispmccitation.js"></script> -->
<link type="text/css" rel="stylesheet" href="vendor/biojsvispmccitation/style.css"/>
<!-- <script type="text/javascript" src="vendor/biojsvispmccitation/biojsvispmccitation.js"></script> -->
<!-- Protein viewer -->
<link type="text/css" rel="stylesheet" href="vendor/proteinFeaturesViewer/main.css"/>
<link type="text/css" rel="stylesheet" href="vendor/proteinFeaturesViewer/fontello.css"/>
<script type="text/javascript" src="vendor/proteinFeaturesViewer/featuresviewer.min.js"></script>
<!-- Pathway viewer -->
<script type="text/javascript" language="javascript" src="/proxy/www.reactome.org/DiagramJs/diagram/diagram.nocache.js"></script>
<!-- Expression Atlas -->
<!-- <script language="JavaScript" type="text/javascript" src="//www.ebi.ac.uk/gxa/resources/js-bundles/vendor.bundle.js"></script> -->
<!-- <script language="JavaScript" type="text/javascript" src="//www.ebi.ac.uk/gxa/resources/js-bundles/expression-atlas-heatmap.bundle.js"></script> -->
<script language="JavaScript" type="text/javascript" src="vendor/expressionAtlasBundle/vendor.bundle.js"></script>
<script language="JavaScript" type="text/javascript" src="vendor/expressionAtlasBundle/expression-atlas-heatmap.bundle.js"></script>
<!-- <script type="text/javascript" src="vendor/expressionAtlasProd/jquery-1.9.1.min.js"></script>
<link type="text/css" rel="stylesheet" href="vendor/expressionAtlasProd/atlas.css"/>
<link type="text/css" rel="stylesheet" href="vendor/expressionAtlasProd/jquery-ui.min.css"/>
<link type="text/css" rel="stylesheet" href="vendor/expressionAtlasProd/table-grid.css"/>
<link type="text/css" rel="stylesheet" href="vendor/expressionAtlasProd/heatmap-and-anatomogram.css"/>
<script type="text/javascript" src="vendor/expressionAtlasProd/react-0.11.1.min.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/jquery-ui.min.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/jquery-migrate-1.2.0.min.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/jquery.ba-throttle-debounce.min.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/jquery.browser.min.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/factorTooltip.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/factorTooltipModule.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/contrastTooltip.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/contrastTooltipModule.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/helpTooltipsModule.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/genePropertiesTooltipModule.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/highlight.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/anatomogramModule.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/jquery.svg.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/EventEmitter-4.2.7.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/jquery.hc-sticky.min.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/modernizr.minified.2.1.6.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/AtlasHeatmapReact.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/highcharts.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/highcharts-more.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/exporting.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/react-radiogroup.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/cellBaselineVariance.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/heatmap.js"></script>
<script type="text/javascript" src="vendor/expressionAtlasProd/heatmapContainer.js"></script> -->
<!-- ie9 cors support -->
<!--[if lte IE 9]>
<script language="JavaScript" type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/jquery-ajaxtransport-xdomainrequest/1.0.3/jquery.xdomainrequest.min.js"></script>
<![endif]-->
<!-- Our angular stuff -->
<script type="text/javascript" src="js/app.js"></script>
<script type="text/javascript" src="js/controllers.js"></script>
<script type="text/javascript" src="js/services.js"></script>
<script type="text/javascript" src="js/api-service.js"></script>
<script type="text/javascript" src="js/dictionary-service.js"></script>
<script type="text/javascript" src="js/const-service.js"></script>
<script type="text/javascript" src="js/config-service.js"></script>
<script type="text/javascript" src="js/filters-service.js"></script>
<script type="text/javascript" src="js/filters.js"></script>
<script type="text/javascript" src="js/search-box-controller.js"></script>
<script type="text/javascript" src="js/target-associations-controller.js"></script>
<script type="text/javascript" src="js/disease-associations-controller.js"></script>
<script type="text/javascript" src="js/target-disease-controller.js"></script>
<script type="text/javascript" src="js/target-controller.js"></script>
<script type="text/javascript" src="js/disease-controller.js"></script>
<script type="text/javascript" src="js/directives.js"></script>
<script type="text/javascript" src="js/evidence-tables-directives.js"></script>
<script type="text/javascript" src="js/target-associations-bubbles-directive.js"></script>
<script type="text/javascript" src="js/disease-graph-directive.js"></script>
<!-- DataTable stuff -->
<script type="text/javascript" src="https://cdn.datatables.net/1.10.9/js/jquery.dataTables.min.js"></script>
<script type="text/javascript" src="https://cdn.datatables.net/plug-ins/3cfcc339e89/integration/bootstrap/3/dataTables.bootstrap.js"></script>
<script type="text/javascript" src="https://cdn.datatables.net/tabletools/2.2.4/js/dataTables.tableTools.min.js"></script>
<!-- Piwik -->
<script type="text/javascript">
var _paq = _paq || [];
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="//www.ebi.ac.uk/web/piwik/";
_paq.push(['setTrackerUrl', u+'piwik.php']);
_paq.push(['setSiteId', 4]);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.type='text/javascript'; g.async=true; g.defer=true; g.src=u+'piwik.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<noscript><p><img src="//www.ebi.ac.uk/web/piwik/piwik.php?idsite=4" style="border:0;" alt="" /></p></noscript>
<!-- End Piwik Code -->
<!-- google analytics -->
<!-- <script>
(function(i,s,o,g,r,a,m){i['GoogleAnalyticsObject']=r;i[r]=i[r]||function(){
(i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m)
})(window,document,'script','//www.google-analytics.com/analytics.js','ga');
ga('create', 'UA-60169661-1', 'auto');
</script> -->
</body>