`sfftk.readers` package

Note

Each module in this package implements an ad hoc reader for a particular file type. The naming convention is <ext>reader, where <ext> is a short and unique description for that file format, typically (but not exclusively) the file extension for the file format e.g. am for AmiraMesh hence amreader module. By ad hoc we mean that the module is designed to conform to the data model of the file format. The :pyformats package adapts the ad hocness to that of EMDB-SFF data model.
Each module should implement at top-level function get_data that takes a string filename and *args, **kwargs and returns an object representing a segmentation from the relevant file format.

AmiraMesh reader

sfftk.readers.amreader

SuRVoS reader

sfftk.readers.survosreader

CCP4 mask reader

sfftk.readers.mapreader

IMOD reader

sfftk.readers.modreader

Segger reader

sfftk.readers.segreader

STAR reader

sfftk.readers.starreader

Stereolithography reader

sfftk.readers.stlreader

Amira HyperSurface reader

sfftk.readers.surfreader