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SouthAfrica.html
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SouthAfrica.html
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<!DOCTYPE html>
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<img src="../logo.png" class="logo" alt=""><h1>SouthAfrica Class for downloading, cleaning and processing notification data</h1>
<small class="dont-index">Source: <a href="https://github.com/epiforecasts/covidregionaldata/blob/HEAD/R/SouthAfrica.R" class="external-link"><code>R/SouthAfrica.R</code></a></small>
<div class="d-none name"><code>SouthAfrica.Rd</code></div>
</div>
<div class="ref-description section level2">
<p>Information for downloading, cleaning
and processing COVID-19 region data for South Africa.</p>
</div>
<div class="section level2">
<h2 id="source">Source<a class="anchor" aria-label="anchor" href="#source"></a></h2>
<p><a href="https://github.com/dsfsi/covid19za/" class="external-link">https://github.com/dsfsi/covid19za/</a></p>
</div>
<div class="section level2">
<h2 id="see-also">See also<a class="anchor" aria-label="anchor" href="#see-also"></a></h2>
<div class="dont-index"><p>Subnational data sources
<code><a href="Belgium.html">Belgium</a></code>,
<code><a href="Brazil.html">Brazil</a></code>,
<code><a href="Canada.html">Canada</a></code>,
<code><a href="Colombia.html">Colombia</a></code>,
<code><a href="Covid19DataHub.html">Covid19DataHub</a></code>,
<code><a href="Cuba.html">Cuba</a></code>,
<code><a href="Estonia.html">Estonia</a></code>,
<code><a href="France.html">France</a></code>,
<code><a href="Germany.html">Germany</a></code>,
<code><a href="Google.html">Google</a></code>,
<code><a href="India.html">India</a></code>,
<code><a href="Italy.html">Italy</a></code>,
<code><a href="JHU.html">JHU</a></code>,
<code><a href="Lithuania.html">Lithuania</a></code>,
<code><a href="Mexico.html">Mexico</a></code>,
<code><a href="Netherlands.html">Netherlands</a></code>,
<code><a href="Switzerland.html">Switzerland</a></code>,
<code><a href="UK.html">UK</a></code>,
<code><a href="USA.html">USA</a></code></p></div>
</div>
<div class="section level2">
<h2 id="super-class">Super class<a class="anchor" aria-label="anchor" href="#super-class"></a></h2>
<p><code><a href="DataClass.html">covidregionaldata::DataClass</a></code> -> <code>SouthAfrica</code></p>
</div>
<div class="section level2">
<h2 id="public-fields">Public fields<a class="anchor" aria-label="anchor" href="#public-fields"></a></h2>
<p></p><div class="r6-fields"><dl><dt><code>origin</code></dt>
<dd><p>name of origin to fetch data for</p></dd>
<dt><code>supported_levels</code></dt>
<dd><p>A list of supported levels.</p></dd>
<dt><code>supported_region_names</code></dt>
<dd><p>A list of region names in order of level.</p></dd>
<dt><code>supported_region_codes</code></dt>
<dd><p>A list of region codes in order of level.</p></dd>
<dt><code>common_data_urls</code></dt>
<dd><p>List of named links to raw data.</p></dd>
<dt><code>source_data_cols</code></dt>
<dd><p>existing columns within the raw data</p></dd>
<dt><code>source_text</code></dt>
<dd><p>Plain text description of the source of the data</p></dd>
<dt><code>source_url</code></dt>
<dd><p>Website address for explanation/introduction of the
data</p></dd>
</dl><p></p></div>
</div>
<div class="section level2">
<h2 id="methods">Methods<a class="anchor" aria-label="anchor" href="#methods"></a></h2>
<div class="section">
<h3 id="public-methods">Public methods<a class="anchor" aria-label="anchor" href="#public-methods"></a></h3>
<ul><li><p><a href="#method-set_region_codes"><code>SouthAfrica$set_region_codes()</code></a></p></li>
<li><p><a href="#method-clean_common"><code>SouthAfrica$clean_common()</code></a></p></li>
<li><p><a href="#method-clone"><code>SouthAfrica$clone()</code></a></p></li>
</ul></div><p><details><summary>Inherited methods</summary><ul><li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="available_regions"><a href="DataClass.html#method-available_regions"><code>covidregionaldata::DataClass$available_regions()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="clean"><a href="DataClass.html#method-clean"><code>covidregionaldata::DataClass$clean()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="download"><a href="DataClass.html#method-download"><code>covidregionaldata::DataClass$download()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="download_JSON"><a href="DataClass.html#method-download_JSON"><code>covidregionaldata::DataClass$download_JSON()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="filter"><a href="DataClass.html#method-filter"><code>covidregionaldata::DataClass$filter()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="get"><a href="DataClass.html#method-get"><code>covidregionaldata::DataClass$get()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="initialize"><a href="DataClass.html#method-initialize"><code>covidregionaldata::DataClass$initialize()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="process"><a href="DataClass.html#method-process"><code>covidregionaldata::DataClass$process()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="return"><a href="DataClass.html#method-return"><code>covidregionaldata::DataClass$return()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="summary"><a href="DataClass.html#method-summary"><code>covidregionaldata::DataClass$summary()</code></a></span></p></li>
<li><p><span class="pkg-link" data-pkg="covidregionaldata" data-topic="DataClass" data-id="test"><a href="DataClass.html#method-test"><code>covidregionaldata::DataClass$test()</code></a></span></p></li>
</ul></details></p><hr><a id="method-set_region_codes"></a><div class="section">
<h3 id="method-set-region-codes-">Method <code>set_region_codes()</code><a class="anchor" aria-label="anchor" href="#method-set-region-codes-"></a></h3>
<p>Set up a table of region codes for clean data</p><div class="section">
<h4 id="usage">Usage<a class="anchor" aria-label="anchor" href="#usage"></a></h4>
<p></p><div class="r"><div class="sourceCode"><pre><code><span class="va">SouthAfrica</span><span class="op">$</span><span class="fu">set_region_codes</span><span class="op">(</span><span class="op">)</span></code></pre></div><p></p></div>
</div>
</div><p></p><hr><a id="method-clean_common"></a><div class="section">
<h3 id="method-clean-common-">Method <code>clean_common()</code><a class="anchor" aria-label="anchor" href="#method-clean-common-"></a></h3>
<p>Province level data cleaning</p><div class="section">
<h4 id="usage-1">Usage<a class="anchor" aria-label="anchor" href="#usage-1"></a></h4>
<p></p><div class="r"><div class="sourceCode"><pre><code><span class="va">SouthAfrica</span><span class="op">$</span><span class="fu">clean_common</span><span class="op">(</span><span class="op">)</span></code></pre></div><p></p></div>
</div>
</div><p></p><hr><a id="method-clone"></a><div class="section">
<h3 id="method-clone-">Method <code>clone()</code><a class="anchor" aria-label="anchor" href="#method-clone-"></a></h3>
<p>The objects of this class are cloneable with this method.</p><div class="section">
<h4 id="usage-2">Usage<a class="anchor" aria-label="anchor" href="#usage-2"></a></h4>
<p></p><div class="r"><div class="sourceCode"><pre><code><span class="va">SouthAfrica</span><span class="op">$</span><span class="fu">clone</span><span class="op">(</span>deep <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span></code></pre></div><p></p></div>
</div>
<div class="section">
<h4 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h4>
<p></p><div class="arguments"><dl><dt><code>deep</code></dt>
<dd><p>Whether to make a deep clone.</p></dd>
</dl><p></p></div>
</div>
</div>
</div>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span></span>
<span class="r-in"><span class="va">region</span> <span class="op"><-</span> <span class="va">SouthAfrica</span><span class="op">$</span><span class="fu">new</span><span class="op">(</span>verbose <span class="op">=</span> <span class="cn">TRUE</span>, steps <span class="op">=</span> <span class="cn">TRUE</span>, get <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span>
<span class="r-in"><span class="va">region</span><span class="op">$</span><span class="kw">return</span><span class="op">(</span><span class="op">)</span></span>
<span class="r-in"><span class="op">}</span></span>
</code></pre></div>
</div>
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