Epicurves description in transmissibility report

[CarmenTamayo]

The report template for transmissibility currently describes that the section "Epidemic curves" generates these curves with or without stratification, however the provided code and resulting epicurves only show stratified epicurves and total no. of cases

@Bisaloo should we also add the total incidence across regions, or remove the "without stratification" bit?
I think we could simply add an overall epicurve/total no. of cases graph to the existing ones

[Bisaloo]

@Bisaloo should we also add the total incidence across regions, or remove the "without stratification" bit?

I don't have a strong preference. Both options sound reasonable and I'm happy to let you decide.

[CarmenTamayo]

Hi @Bisaloo , I've noticed that on the package's vignette there's indeed an epicurve with overall cases, but this seems to be no longer available on the current template's code- was there a reason for this can you remember? I'll try find the og code

[CarmenTamayo]

Fixed in #144

[Bisaloo]

Context: this was removed from incidence2 for a while but have been reintroduced in reconverse/incidence2@cda7bf0.