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setup.py
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setup.py
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# Copyright (c) 2014, Salesforce.com, Inc. All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions
# are met:
#
# - Redistributions of source code must retain the above copyright
# notice, this list of conditions and the following disclaimer.
# - Redistributions in binary form must reproduce the above copyright
# notice, this list of conditions and the following disclaimer in the
# documentation and/or other materials provided with the distribution.
# - Neither the name of Salesforce.com nor the names of its contributors
# may be used to endorse or promote products derived from this
# software without specific prior written permission.
#
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
# "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
# LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS
# FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE
# COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
# INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
# BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS
# OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
# ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR
# TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE
# USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
import os
import re
from setuptools import setup, Extension, Feature
try:
from Cython.Distutils import build_ext
cython = True
print 'building cython extensions'
except ImportError:
cython = False
print 'not building cython extensions'
VERSION = None
with open(os.path.join('distributions', '__init__.py')) as f:
for line in f:
if re.match("__version__ = '\S+'$", line):
VERSION = line.split()[-1].strip("'")
assert VERSION, 'could not determine version'
with open('README.md') as f:
long_description = f.read()
def extension(name):
name_pyx = '{}.pyx'.format(name.replace('.', '/'))
return Extension(
name,
sources=[name_pyx],
language='c++',
include_dirs=['include'],
libraries=['m', 'distributions_shared'],
library_dirs=['build/src'],
extra_compile_args=[
'-std=c++0x',
'-Wall',
'-Werror',
'-Wno-unused-function',
'-Wno-sign-compare',
'-Wno-strict-aliasing',
'-O3',
'-ffast-math',
'-funsafe-math-optimizations',
#'-fno-trapping-math',
#'-ffinite-math-only',
#'-fvect-cost-model',
'-mfpmath=sse',
'-msse4.1',
#'-mavx',
#'-mrecip',
#'-march=native',
],
)
model_feature = Feature(
'cython models',
standard=True,
optional=True,
ext_modules=[
extension('distributions.hp.special'),
extension('distributions.hp.random'),
extension('distributions.hp.models.dd'),
extension('distributions.hp.models.gp'),
extension('distributions.hp.models.nich'),
extension('distributions.hp.models.dpd'),
extension('distributions.lp.special'),
extension('distributions.lp.random'),
extension('distributions.lp.vector'),
extension('distributions.lp.models.dd'),
extension('distributions.lp.models.gp'),
extension('distributions.lp.models.nich'),
extension('distributions.lp.models.dpd'),
extension('distributions.lp.clustering'),
]
)
config = {
'version': VERSION,
'name': 'distributions',
'description': 'Primitives for Bayesian MCMC inference',
'long_description': long_description,
'url': 'https://github.com/forcedotcom/distributions',
'author': 'Jonathan Glidden, Eric Jonas, Fritz Obermeyer, Cap Petschulat',
'maintainer': 'Fritz Obermeyer',
'maintainer_email': 'fobermeyer@salesforce.com',
'license': 'Revised BSD',
'features': {'cython': model_feature},
'packages': [
'distributions',
'distributions.dbg',
'distributions.dbg.models',
'distributions.tests',
],
}
if cython:
config['cmdclass'] = {'build_ext': build_ext}
config['packages'] += [
'distributions.hp',
'distributions.hp.models',
'distributions.lp',
'distributions.lp.models',
]
setup(**config)