Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

(Apple Silicon): crashes with Getting signal 16 received but handler not on signal stack #11

Open
vdayanand opened this issue Dec 12, 2023 · 1 comment
Open

(Apple Silicon): crashes with Getting signal 16 received but handler not on signal stack #11

vdayanand opened this issue Dec 12, 2023 · 1 comment

Comments

@vdayanand
Copy link

MWE:

tmp/yu julia --project=. 
               _
   _       _ _(_)_     |  Documentation: https://docs.julialang.org
  (_)     | (_) (_)    |
   _ _   _| |_  __ _   |  Type "?" for help, "]?" for Pkg help.
  | | | | | | |/ _` |  |
  | | |_| | | | (_| |  |  Version 1.9.2 (2023-07-05)
 _/ |\__'_|_|_|\__'_|  |  Official https://julialang.org/ release
|__/                   |

julia> using Pkg; Pkg.add("LibPQ");Pkg.add("LicenseCheck")
julia> using LibPQ
[ Info: Precompiling LibPQ [194296ae-ab2e-5f79-8cd4-7183a0a5a0d1]
julia> using LicenseCheck

julia> lic = find_license(<PATH to any source code folder>)

signal 16 received but handler not on signal stack
fatal error: non-Go code set up signal handler without SA_ONSTACK flag

runtime stack:
runtime.throw({0x13685f26b?, 0x1400004d680?})
	/opt/x86_64-linux-musl/go/src/runtime/panic.go:1047 +0x40 fp=0x1400029afe0 sp=0x1400029afb0 pc=0x1367d2580
runtime.sigNotOnStack(0x10)
	/opt/x86_64-linux-musl/go/src/runtime/signal_unix.go:1020 +0x5c fp=0x1400029b000 sp=0x1400029afe0 pc=0x1367e770c
runtime.adjustSignalStack(0x10, 0x1400004c000, 0x1400029b0a8)
	/opt/x86_64-linux-musl/go/src/runtime/signal_unix.go:581 +0x250 fp=0x1400029b070 sp=0x1400029b000 pc=0x1367e6a10
runtime.sigtrampgo(0x10, 0x1400029b210, 0x1400029b278)
	/opt/x86_64-linux-musl/go/src/runtime/signal_unix.go:469 +0x174 fp=0x1400029b0f0 sp=0x1400029b070 pc=0x1367e6664
runtime.sigtrampgo(0x10, 0x1400029b210, 0x1400029b278)
	<autogenerated>:1 +0x1c fp=0x1400029b120 sp=0x1400029b0f0 pc=0x1367ffd1c
runtime.sigtramp()
	/opt/x86_64-linux-musl/go/src/runtime/sys_darwin_arm64.s:227 +0x4c fp=0x1400029b1e0 sp=0x1400029b120 pc=0x1367ff2cc

goroutine 18 [syscall, locked to thread]:
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x1400005bfe0 sp=0x1400005bfe0 pc=0x1367fe534

goroutine 6 [GC worker (idle)]:
runtime.gopark(0x0?, 0x0?, 0x0?, 0x0?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x1400004a740 sp=0x1400004a720 pc=0x1367d4ec4
runtime.gcBgMarkWorker()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1235 +0xec fp=0x1400004a7d0 sp=0x1400004a740 pc=0x1367b95cc
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x1400004a7d0 sp=0x1400004a7d0 pc=0x1367fe534
created by runtime.gcBgMarkStartWorkers
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1159 +0x28

goroutine 17 [running, locked to thread]:
	goroutine running on other thread; stack unavailable

goroutine 2 [force gc (idle)]:
runtime.gopark(0x0?, 0x0?, 0x0?, 0x0?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x14000048fa0 sp=0x14000048f80 pc=0x1367d4ec4
runtime.goparkunlock(...)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:369
runtime.forcegchelper()
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:302 +0xb4 fp=0x14000048fd0 sp=0x14000048fa0 pc=0x1367d4d54
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x14000048fd0 sp=0x14000048fd0 pc=0x1367fe534
created by runtime.init.6
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:290 +0x24

goroutine 3 [GC sweep wait]:
runtime.gopark(0x1?, 0x0?, 0x0?, 0x0?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x14000049770 sp=0x14000049750 pc=0x1367d4ec4
runtime.goparkunlock(...)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:369
runtime.bgsweep(0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/mgcsweep.go:297 +0x10c fp=0x140000497b0 sp=0x14000049770 pc=0x1367c2d7c
runtime.gcenable.func1()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:178 +0x28 fp=0x140000497d0 sp=0x140000497b0 pc=0x1367b73d8
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x140000497d0 sp=0x140000497d0 pc=0x1367fe534
created by runtime.gcenable
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:178 +0x70

goroutine 4 [GC scavenge wait]:
runtime.gopark(0x5c591d?, 0x6553f100?, 0x0?, 0x0?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x14000049f50 sp=0x14000049f30 pc=0x1367d4ec4
runtime.goparkunlock(...)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:369
runtime.(*scavengerState).park(0x136c7a760)
	/opt/x86_64-linux-musl/go/src/runtime/mgcscavenge.go:389 +0x5c fp=0x14000049f80 sp=0x14000049f50 pc=0x1367c0cdc
runtime.bgscavenge(0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/mgcscavenge.go:622 +0xac fp=0x14000049fb0 sp=0x14000049f80 pc=0x1367c12dc
runtime.gcenable.func2()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:179 +0x28 fp=0x14000049fd0 sp=0x14000049fb0 pc=0x1367b7378
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x14000049fd0 sp=0x14000049fd0 pc=0x1367fe534
created by runtime.gcenable
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:179 +0xb4

goroutine 5 [finalizer wait]:
runtime.gopark(0x60000000000000?, 0x0?, 0x8?, 0x1?, 0x2000000000?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x14000048580 sp=0x14000048560 pc=0x1367d4ec4
runtime.goparkunlock(...)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:369
runtime.runfinq()
	/opt/x86_64-linux-musl/go/src/runtime/mfinal.go:180 +0x128 fp=0x140000487d0 sp=0x14000048580 pc=0x1367b65f8
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x140000487d0 sp=0x140000487d0 pc=0x1367fe534
created by runtime.createfing
	/opt/x86_64-linux-musl/go/src/runtime/mfinal.go:157 +0x94

goroutine 19 [GC worker (idle)]:
runtime.gopark(0x136ca9bc0?, 0x3?, 0x85?, 0x45?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x14000044740 sp=0x14000044720 pc=0x1367d4ec4
runtime.gcBgMarkWorker()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1235 +0xec fp=0x140000447d0 sp=0x14000044740 pc=0x1367b95cc
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x140000447d0 sp=0x140000447d0 pc=0x1367fe534
created by runtime.gcBgMarkStartWorkers
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1159 +0x28

goroutine 7 [GC worker (idle)]:
runtime.gopark(0x136ca9bc0?, 0x1?, 0xc8?, 0x39?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x1400004af40 sp=0x1400004af20 pc=0x1367d4ec4
runtime.gcBgMarkWorker()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1235 +0xec fp=0x1400004afd0 sp=0x1400004af40 pc=0x1367b95cc
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x1400004afd0 sp=0x1400004afd0 pc=0x1367fe534
created by runtime.gcBgMarkStartWorkers
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1159 +0x28

goroutine 8 [GC worker (idle)]:
runtime.gopark(0x12c5717ef949?, 0x3?, 0x3c?, 0x73?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x1400004b740 sp=0x1400004b720 pc=0x1367d4ec4
runtime.gcBgMarkWorker()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1235 +0xec fp=0x1400004b7d0 sp=0x1400004b740 pc=0x1367b95cc
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x1400004b7d0 sp=0x1400004b7d0 pc=0x1367fe534
created by runtime.gcBgMarkStartWorkers
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1159 +0x28

goroutine 9 [GC worker (idle)]:
runtime.gopark(0x136ca9bc0?, 0x1?, 0xae?, 0xe4?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x1400004bf40 sp=0x1400004bf20 pc=0x1367d4ec4
runtime.gcBgMarkWorker()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1235 +0xec fp=0x1400004bfd0 sp=0x1400004bf40 pc=0x1367b95cc
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x1400004bfd0 sp=0x1400004bfd0 pc=0x1367fe534
created by runtime.gcBgMarkStartWorkers
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1159 +0x28

goroutine 20 [GC worker (idle)]:
runtime.gopark(0x136ca9bc0?, 0x1?, 0x5f?, 0xed?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x14000044f40 sp=0x14000044f20 pc=0x1367d4ec4
runtime.gcBgMarkWorker()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1235 +0xec fp=0x14000044fd0 sp=0x14000044f40 pc=0x1367b95cc
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x14000044fd0 sp=0x14000044fd0 pc=0x1367fe534
created by runtime.gcBgMarkStartWorkers
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1159 +0x28

goroutine 21 [GC worker (idle)]:
runtime.gopark(0x12c5717ef9f0?, 0x0?, 0x0?, 0x0?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x14000045740 sp=0x14000045720 pc=0x1367d4ec4
runtime.gcBgMarkWorker()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1235 +0xec fp=0x140000457d0 sp=0x14000045740 pc=0x1367b95cc
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x140000457d0 sp=0x140000457d0 pc=0x1367fe534
created by runtime.gcBgMarkStartWorkers
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1159 +0x28

goroutine 35 [GC worker (idle)]:
runtime.gopark(0x12c5717ef6af?, 0x3?, 0x1d?, 0x1e?, 0x0?)
	/opt/x86_64-linux-musl/go/src/runtime/proc.go:363 +0xe4 fp=0x14000508740 sp=0x14000508720 pc=0x1367d4ec4
runtime.gcBgMarkWorker()
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1235 +0xec fp=0x140005087d0 sp=0x14000508740 pc=0x1367b95cc
runtime.goexit()
	/opt/x86_64-linux-musl/go/src/runtime/asm_arm64.s:1165 +0x4 fp=0x140005087d0 sp=0x140005087d0 pc=0x1367fe534
created by runtime.gcBgMarkStartWorkers
	/opt/x86_64-linux-musl/go/src/runtime/mgc.go:1159 +0x28

[28939] signal (6): Abort trap: 6
in expression starting at REPL[3]:1
__pthread_kill at /usr/lib/system/libsystem_kernel.dylib (unknown line)
Allocations: 5961551 (Pool: 5954502; Big: 7049); GC: 8
[1]    28939 abort      julia --project=.

versioninfo (reproducible on latest version as well)

julia> versioninfo()
Julia Version 1.9.2
Commit e4ee485e909 (2023-07-05 09:39 UTC)
Platform Info:
  OS: macOS (arm64-apple-darwin22.4.0)
  CPU: 8 × Apple M1 Pro
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-14.0.6 (ORCJIT, apple-m1)
  Threads: 1 on 6 virtual cores
@vdayanand vdayanand changed the title (Apple Silicon): Getting signal 16 received but handler not on signal stack (Apple Silicon): crashes with Getting signal 16 received but handler not on signal stack Dec 12, 2023
@ericphanson
Copy link
Owner

I can reproduce on Julia v1.10.2; running the tests of this package in a loop tends to do it:

for i = 1:10000
              println(i); include("runtests.jl")
              end

Also if I press ctrl-t to send a siginfo, that will do it.

However, it does not seem to happen with nightly Julia. So I suspect it is a Julia bug that has been fixed, but I'm not sure when.

I thought at first it was JuliaLang/julia#51284, but I can trigger the issue on that commit, plus it's been backported anyway.

This was referenced Mar 3, 2024
Closed
Closed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@ericphanson @vdayanand