301 lines (282 loc) · 11.1 KB
/
CI.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
name: CI
on:
push:
branches: [main]
pull_request:
branches: [main]
env:
BUILD_TYPE: Debug
jobs:
build:
strategy:
matrix:
# The order of these definition matters for the web output
# TODO: Test on 32-bit systems (not possible with Github Actions?)
# TODO: Test on Windows
os: [ubuntu-20.04, macos-11]
mpi: [MPICH, OpenMPI]
findmpi: [MPIEXEC_EXECUTABLE, MPI_HOME, CMAKE_C_COMPILER]
shared: [OFF, ON]
mpitrampoline: [07b5042df3ccc57e0dbedb2d314cfcd992360709]
mpiwrapper: [e0b1be3dff4dbe3867a52103444c233daf160bb0]
exclude:
- os: macos-11
shared: ON
runs-on: ${{matrix.os}}
steps:
- uses: actions/checkout@v3
- name: Install system packages
run: |
case $RUNNER_OS in
Linux)
sudo apt-get update
case "${{matrix.mpi}}" in
MPICH) sudo apt-get install libmpich-dev;;
OpenMPI) sudo apt-get install libopenmpi-dev;;
esac
;;
macOS)
case "${{matrix.mpi}}" in
MPICH) :;;
OpenMPI) brew install automake;;
esac
;;
esac
- name: Cache MPI
id: cache-mpi
uses: actions/cache@v3
with:
path: ${{github.workspace}}/mpi
key: ${{runner.os}}-${{matrix.mpi}}-${{matrix.shared}}-v2
- name: Install MPI ${{matrix.mpi}}
if: steps.cache-mpi.outputs.cache-hit != 'true'
run: |
case $RUNNER_OS in
Linux)
;;
macOS)
case ${{matrix.mpi}} in
MPICH)
wget https://www.mpich.org/static/downloads/4.0.3/mpich-4.0.3.tar.gz
tar xzf mpich*.tar.gz
cd mpich*
# Use GCC-11 from Homebrew
export CC=gcc-11
export CXX=g++-11
export F77=gfortran-11
export FC=gfortran-11
if [ ${{matrix.shared}} = OFF ]; then
export FFLAGS='-fallow-argument-mismatch'
export FCFLAGS='-fallow-argument-mismatch'
./configure \
--disable-opencl \
--enable-threads=multiple \
--enable-two-level-namespace \
--prefix=${{github.workspace}}/mpi
else
# On macOS, MPItrampoline shared libraries work
# only for statically linked MPICH libraries.
export CFLAGS='-fPIC -DPIC'
export CXXLAGS='-fPIC -DPIC'
export FFLAGS='-fPIC -DPIC -fallow-argument-mismatch'
export FCFLAGS='-fPIC -DPIC -fallow-argument-mismatch'
./configure \
--disable-opencl \
--disable-shared \
--enable-static \
--enable-threads=multiple \
--enable-two-level-namespace \
--prefix=${{github.workspace}}/mpi
fi
make -j2
make -j2 install
;;
OpenMPI)
wget https://download.open-mpi.org/release/open-mpi/v4.1/openmpi-4.1.4.tar.gz
tar xzf openmpi*.tar.gz
cd openmpi*
# Use GCC-11 from Homebrew
export CC=gcc-11
export CXX=g++-11
export F77=gfortran-11
export FC=gfortran-11
# On macOS, MPItrampoline works only for statically
# linked OpenMPI libraries.
find . -type f -print0 | xargs -0 perl -pi -e 's/-Wl,-flat_namespace//g;s/\$\{wl\}-flat_namespace//g'
./autogen.pl --force
export CFLAGS='-fPIC -DPIC'
export CXXLAGS='-fPIC -DPIC'
export FFLAGS='-fPIC -DPIC -fallow-argument-mismatch'
export FCFLAGS='-fPIC -DPIC -fallow-argument-mismatch'
./configure \
--disable-man-pages \
--disable-shared \
--enable-mpi-fortran=usempif08 \
--enable-static \
--prefix=${{github.workspace}}/mpi
make -j2
make -j2 install
;;
esac
;;
esac
- name: Install MPIwrapper/${{matrix.mpi}}
run: |
# See MPIwrapper
export PATH="${{github.workspace}}/mpi/bin:$PATH"
git clone https://github.com/eschnett/MPIwrapper
cd MPIwrapper
git checkout ${{matrix.mpiwrapper}}
cmake -S . -B build \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DCMAKE_C_COMPILER=mpicc \
-DCMAKE_CXX_COMPILER=mpicxx \
-DCMAKE_Fortran_COMPILER=mpifort \
-DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} \
-DCMAKE_INSTALL_PREFIX=$HOME/mpiwrapper-${{matrix.mpi}}
cmake --build build --config ${{env.BUILD_TYPE}}
cmake --install build --config ${{env.BUILD_TYPE}}
- name: Install MPItrampoline
run: |
git clone https://github.com/eschnett/MPItrampoline
cd MPItrampoline
git checkout ${{matrix.mpitrampoline}}
case $RUNNER_OS in
Linux)
# do nothing
;;
macOS)
# Use GCC-11 from Homebrew
export CC=gcc-11
export CXX=g++-11
export FC=gfortran-11
;;
esac
cmake -S . -B build \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} \
-DBUILD_SHARED_LIBS=${{matrix.shared}} \
-DCMAKE_INSTALL_PREFIX=$HOME/mpitrampoline
cmake --build build
cmake --install build
- name: Configure Tests
run: |
case $RUNNER_OS in
Linux)
# Not needed for CMAKE_C_COMPILER
export FFLAGS='-fcray-pointer'
;;
macOS)
# Use GCC-11 from Homebrew
export CC=gcc-11
export CXX=g++-11
export FC=gfortran-11
# Not needed for CMAKE_C_COMPILER
export FFLAGS='-fallow-argument-mismatch -fcray-pointer'
;;
esac
case "${{matrix.findmpi}}" in
MPIEXEC_EXECUTABLE)
cmake -B ${{github.workspace}}/build \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DMPIEXEC_EXECUTABLE=$HOME/mpitrampoline/bin/mpiexec \
-DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} \
-DCMAKE_INSTALL_PREFIX=$HOME/mpitest
;;
MPI_HOME)
cmake -B ${{github.workspace}}/build \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DMPI_HOME=$HOME/mpitrampoline \
-DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} \
-DCMAKE_INSTALL_PREFIX=$HOME/mpitest
;;
CMAKE_C_COMPILER)
cmake -B ${{github.workspace}}/build \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DCMAKE_C_COMPILER=$HOME/mpitrampoline/bin/mpicc \
-DCMAKE_CXX_COMPILER=$HOME/mpitrampoline/bin/mpicxx \
-DCMAKE_Fortran_COMPILER=$HOME/mpitrampoline/bin/mpifort \
-DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} \
-DCMAKE_INSTALL_PREFIX=$HOME/mpitest
;;
esac
- name: Build tests
run: |
case $RUNNER_OS in
Linux)
export FFLAGS='-fcray-pointer'
;;
macOS)
# Use GCC-11 from Homebrew
export CC=gcc-11
export CXX=g++-11
export FC=gfortran-11
export FFLAGS='-fallow-argument-mismatch -fcray-pointer'
export MPITRAMPOLINE_CC=gcc-11
export MPITRAMPOLINE_CXX=g++-11
export MPITRAMPOLINE_FC=gfortran-11
;;
esac
cmake --build ${{github.workspace}}/build --config ${{env.BUILD_TYPE}}
- name: Install tests
run: cmake --install ${{github.workspace}}/build --config ${{env.BUILD_TYPE}}
- name: Test C ${{matrix.mpi}}
run: |
case "${{matrix.mpi}}" in
MPICH) mpiexec_options='';;
OpenMPI) mpiexec_options='--oversubscribe';;
esac
export MPITRAMPOLINE_VERBOSE=1
export MPITRAMPOLINE_MPIEXEC=$HOME/mpiwrapper-${{matrix.mpi}}/bin/mpiwrapperexec
export MPITRAMPOLINE_LIB=$HOME/mpiwrapper-${{matrix.mpi}}/lib/libmpiwrapper.so
$HOME/mpitrampoline/bin/mpiexec ${mpiexec_options} -n 4 $HOME/mpitest/bin/mpi-test-c
- name: Test C++ ${{matrix.mpi}}
run: |
case "${{matrix.mpi}}" in
MPICH) mpiexec_options='';;
OpenMPI) mpiexec_options='--oversubscribe';;
esac
export MPITRAMPOLINE_VERBOSE=1
export MPITRAMPOLINE_MPIEXEC=$HOME/mpiwrapper-${{matrix.mpi}}/bin/mpiwrapperexec
export MPITRAMPOLINE_LIB=$HOME/mpiwrapper-${{matrix.mpi}}/lib/libmpiwrapper.so
$HOME/mpitrampoline/bin/mpiexec ${mpiexec_options} -n 4 $HOME/mpitest/bin/mpi-test-cxx
- name: Test Fortran 77 mpif ${{matrix.mpi}}
run: |
case "${{matrix.mpi}}" in
MPICH) mpiexec_options='';;
OpenMPI) mpiexec_options='--oversubscribe';;
esac
export MPITRAMPOLINE_VERBOSE=1
export MPITRAMPOLINE_MPIEXEC=$HOME/mpiwrapper-${{matrix.mpi}}/bin/mpiwrapperexec
export MPITRAMPOLINE_LIB=$HOME/mpiwrapper-${{matrix.mpi}}/lib/libmpiwrapper.so
$HOME/mpitrampoline/bin/mpiexec ${mpiexec_options} -n 4 $HOME/mpitest/bin/mpi-test-mpif-f
- name: Test Fortran 90 mpif ${{matrix.mpi}}
run: |
case "${{matrix.mpi}}" in
MPICH) mpiexec_options='';;
OpenMPI) mpiexec_options='--oversubscribe';;
esac
export MPITRAMPOLINE_VERBOSE=1
export MPITRAMPOLINE_MPIEXEC=$HOME/mpiwrapper-${{matrix.mpi}}/bin/mpiwrapperexec
export MPITRAMPOLINE_LIB=$HOME/mpiwrapper-${{matrix.mpi}}/lib/libmpiwrapper.so
$HOME/mpitrampoline/bin/mpiexec ${mpiexec_options} -n 4 $HOME/mpitest/bin/mpi-test-mpif-f90
- name: Test Fortran 90 mpi ${{matrix.mpi}}
run: |
case "${{matrix.mpi}}" in
MPICH) mpiexec_options='';;
OpenMPI) mpiexec_options='--oversubscribe';;
esac
export MPITRAMPOLINE_VERBOSE=1
export MPITRAMPOLINE_MPIEXEC=$HOME/mpiwrapper-${{matrix.mpi}}/bin/mpiwrapperexec
export MPITRAMPOLINE_LIB=$HOME/mpiwrapper-${{matrix.mpi}}/lib/libmpiwrapper.so
$HOME/mpitrampoline/bin/mpiexec ${mpiexec_options} -n 4 $HOME/mpitest/bin/mpi-test-mpi-f90
- name: Test Fortran 90 mpi_f08 ${{matrix.mpi}}
run: |
case "${{matrix.mpi}}" in
MPICH) mpiexec_options='';;
OpenMPI) mpiexec_options='--oversubscribe';;
esac
export MPITRAMPOLINE_VERBOSE=1
export MPITRAMPOLINE_MPIEXEC=$HOME/mpiwrapper-${{matrix.mpi}}/bin/mpiwrapperexec
export MPITRAMPOLINE_LIB=$HOME/mpiwrapper-${{matrix.mpi}}/lib/libmpiwrapper.so
$HOME/mpitrampoline/bin/mpiexec ${mpiexec_options} -n 4 $HOME/mpitest/bin/mpi-test-mpi_f08-f90