-
Notifications
You must be signed in to change notification settings - Fork 2
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
importing arw file #26
Comments
Hi Carla, |
Hi Ethan, Thanks for your prompt reply. I am attaching the file that we used with chromConverter version 0.2.1 |
Thank you very much for providing the file. It turns out there were actually a couple of problems. The error you were getting was caused by a stray unicode character, but also your file is from a PDA detector which wasn't supported by the parser up to now because I didn't have any example files to work with. I added a few lines to the parser that seem to resolve both issues. You can try installing the new version of chromConverter from GitHub (ethanbass/chromConverter@f99f4b1) using the install_github function from the remotes package (e.g. I think the new parser should be able to read your files correctly but please let me know if you run into any more issues or notice any problems with the output. The file you sent is the only example I have of an all best, |
Curious if you got this working? |
I am going to close this issue for now, as I believe it has been resolved by ethanbass/chromConverter@f99f4b1. Feel free to reopen if you're still having any issues. Thanks! |
Ethan, |
I am importing an .arw file using chromConveter and I am getting the following message:
Warning messages:
1: In strsplit(readLines(file, n = 2), "\t") :
unable to translate '"PDA Exposure Time" "Processing Locked" "Sampling Rate" "Scale to V" "Source S/W Info" "Det. Units" "Data Start" "Data End" "Channel Type" "Channel Status" "Channel Id" "Channel Description" "Channel" "# of Results Stored"' to a wide string
2: In strsplit(readLines(file, n = 2), "\t") : input string 1 is invalid
Your help would be more than appreciated.
Carla
The text was updated successfully, but these errors were encountered: