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raxml.lsd2_drm_stats.tex
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raxml.lsd2_drm_stats.tex
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DRM&class&1st ARV&resistant&resistant-treated&resistant-naive&TDR&TDR clusters&cluster sizes&ADR&losses\\
\scriptsize{RT:S68G}&\scriptsize{NRTI}&\scriptsize{polym.}&3178 \scriptsize{(8.1\%)}&436 \scriptsize{(13.7\%)}&2482 \scriptsize{(78.1\%)}&2436.00 \scriptsize{(76.7\%)}&249&1-759&803.00 \scriptsize{(25.3\%)}&61 \scriptsize{(1.9\%)}\\
\scriptsize{RT:K103N}&\scriptsize{NNRTI}&\scriptsize{NVP'96}&2025 \scriptsize{(5.2\%)}&1104 \scriptsize{(54.5\%)}&745 \scriptsize{(36.8\%)}&1071.51 \scriptsize{(52.9\%)}&516.5&1-78&1088.49 \scriptsize{(53.8\%)}&135 \scriptsize{(6.7\%)}\\
\scriptsize{RT:M184V}&\scriptsize{NRTI}&\scriptsize{AZT'87}&1899 \scriptsize{(4.8\%)}&1642 \scriptsize{(86.5\%)}&110 \scriptsize{(5.8\%)}&343.62 \scriptsize{(18.1\%)}&278.5&1-4&1667.38 \scriptsize{(87.8\%)}&112 \scriptsize{(5.9\%)}\\
\scriptsize{RT:M41L}&\scriptsize{NRTI}&\scriptsize{AZT'87}&1513 \scriptsize{(3.9\%)}&982 \scriptsize{(64.9\%)}&428 \scriptsize{(28.3\%)}&618.50 \scriptsize{(40.9\%)}&305.5&1-55&968.50 \scriptsize{(64.0\%)}&74 \scriptsize{(4.9\%)}\\
\scriptsize{RT:V106I}&\scriptsize{NNRTI}&\scriptsize{polym.}&1051 \scriptsize{(2.7\%)}&217 \scriptsize{(20.6\%)}&715 \scriptsize{(68.0\%)}&540.00 \scriptsize{(51.4\%)}&150&1-74&647.00 \scriptsize{(61.6\%)}&136 \scriptsize{(12.9\%)}\\
\scriptsize{RT:D67N}&\scriptsize{NRTI}&\scriptsize{AZT'87}&1035 \scriptsize{(2.6\%)}&806 \scriptsize{(77.9\%)}&150 \scriptsize{(14.5\%)}&273.00 \scriptsize{(26.4\%)}&170.5&1-21&794.00 \scriptsize{(76.7\%)}&32 \scriptsize{(3.1\%)}\\
\scriptsize{RT:T215Y}&\scriptsize{NRTI}&\scriptsize{AZT'87}&883 \scriptsize{(2.3\%)}&790 \scriptsize{(89.5\%)}&37 \scriptsize{(4.2\%)}&119.50 \scriptsize{(13.5\%)}&102.5&1-5&785.50 \scriptsize{(89.0\%)}&22 \scriptsize{(2.5\%)}\\
\scriptsize{RT:E138A}&\scriptsize{NNRTI}&\scriptsize{polym.}&862 \scriptsize{(2.2\%)}&163 \scriptsize{(18.9\%)}&637 \scriptsize{(73.9\%)}&523.00 \scriptsize{(60.7\%)}&117&1-158&393.00 \scriptsize{(45.6\%)}&54 \scriptsize{(6.3\%)}\\
\scriptsize{PR:L90M}&\scriptsize{PI}&\scriptsize{SQV'95}&849 \scriptsize{(2.2\%)}&480 \scriptsize{(56.5\%)}&289 \scriptsize{(34.0\%)}&460.77 \scriptsize{(54.3\%)}&128&1-114&450.23 \scriptsize{(53.0\%)}&62 \scriptsize{(7.3\%)}\\
\scriptsize{RT:V179D}&\scriptsize{NNRTI}&\scriptsize{polym.}&790 \scriptsize{(2.0\%)}&151 \scriptsize{(19.1\%)}&559 \scriptsize{(70.8\%)}&415.00 \scriptsize{(52.5\%)}&93&1-45&438.00 \scriptsize{(55.4\%)}&63 \scriptsize{(8.0\%)}\\
\scriptsize{RT:K70R}&\scriptsize{NRTI}&\scriptsize{AZT'87}&711 \scriptsize{(1.8\%)}&610 \scriptsize{(85.8\%)}&54 \scriptsize{(7.6\%)}&143.75 \scriptsize{(20.2\%)}&98.5&1-7&615.25 \scriptsize{(86.5\%)}&48 \scriptsize{(6.8\%)}\\
\scriptsize{RT:L210W}&\scriptsize{NRTI}&\scriptsize{AZT'87}&705 \scriptsize{(1.8\%)}&520 \scriptsize{(73.8\%)}&140 \scriptsize{(19.9\%)}&205.00 \scriptsize{(29.1\%)}&147&1-9&524.00 \scriptsize{(74.3\%)}&24 \scriptsize{(3.4\%)}\\
\scriptsize{RT:Y181C}&\scriptsize{NNRTI}&\scriptsize{NVP'96}&694 \scriptsize{(1.8\%)}&495 \scriptsize{(71.3\%)}&115 \scriptsize{(16.6\%)}&208.00 \scriptsize{(30.0\%)}&148&1-12&509.00 \scriptsize{(73.3\%)}&23 \scriptsize{(3.3\%)}\\
\scriptsize{RT:K219Q}&\scriptsize{NRTI}&\scriptsize{AZT'87}&563 \scriptsize{(1.4\%)}&322 \scriptsize{(57.2\%)}&194 \scriptsize{(34.5\%)}&307.25 \scriptsize{(54.6\%)}&99&1-92&303.75 \scriptsize{(54.0\%)}&48 \scriptsize{(8.5\%)}\\
\scriptsize{RT:H221Y}&\scriptsize{NNRTI}&\scriptsize{NVP'96}&475 \scriptsize{(1.2\%)}&269 \scriptsize{(56.6\%)}&162 \scriptsize{(34.1\%)}&220.00 \scriptsize{(46.3\%)}&87&1-64&267.00 \scriptsize{(56.2\%)}&12 \scriptsize{(2.5\%)}\\
\scriptsize{RT:T215D}&\scriptsize{NRTI}&\scriptsize{AZT'87}&462 \scriptsize{(1.2\%)}&86 \scriptsize{(18.6\%)}&334 \scriptsize{(72.3\%)}&459.25 \scriptsize{(99.4\%)}&103&1-99&71.75 \scriptsize{(15.5\%)}&69 \scriptsize{(14.9\%)}\\
\scriptsize{RT:G190A}&\scriptsize{NNRTI}&\scriptsize{NVP'96}&447 \scriptsize{(1.1\%)}&342 \scriptsize{(76.5\%)}&68 \scriptsize{(15.2\%)}&117.25 \scriptsize{(26.2\%)}&97&1-6&350.75 \scriptsize{(78.5\%)}&21 \scriptsize{(4.7\%)}\\
\scriptsize{RT:V108I}&\scriptsize{NNRTI}&\scriptsize{NVP'96}&429 \scriptsize{(1.1\%)}&219 \scriptsize{(51.0\%)}&167 \scriptsize{(38.9\%)}&230.00 \scriptsize{(53.6\%)}&166&1-8&232.00 \scriptsize{(54.1\%)}&33 \scriptsize{(7.7\%)}\\
\scriptsize{PR:M46I}&\scriptsize{PI}&\scriptsize{SQV'95}&378 \scriptsize{(1.0\%)}&246 \scriptsize{(65.1\%)}&97 \scriptsize{(25.7\%)}&140.39 \scriptsize{(37.1\%)}&108.5&1-6&250.61 \scriptsize{(66.3\%)}&13 \scriptsize{(3.4\%)}\\
\scriptsize{RT:T215S}&\scriptsize{NRTI}&\scriptsize{AZT'87}&378 \scriptsize{(1.0\%)}&59 \scriptsize{(15.6\%)}&293 \scriptsize{(77.5\%)}&364.25 \scriptsize{(96.4\%)}&115&1-45&51.75 \scriptsize{(13.7\%)}&38 \scriptsize{(10.1\%)}\\
\scriptsize{PR:V82A}&\scriptsize{PI}&\scriptsize{SQV'95}&295 \scriptsize{(0.8\%)}&216 \scriptsize{(73.2\%)}&51 \scriptsize{(17.3\%)}&88.02 \scriptsize{(29.8\%)}&53&1-11&218.98 \scriptsize{(74.2\%)}&12 \scriptsize{(4.1\%)}\\
\scriptsize{RT:E44D}&\scriptsize{NRTI}&\scriptsize{AZT'87}&294 \scriptsize{(0.8\%)}&180 \scriptsize{(61.2\%)}&93 \scriptsize{(31.6\%)}&129.62 \scriptsize{(44.1\%)}&77&1-29&183.38 \scriptsize{(62.4\%)}&19 \scriptsize{(6.5\%)}\\
\scriptsize{RT:K101E}&\scriptsize{NNRTI}&\scriptsize{NVP'96}&276 \scriptsize{(0.7\%)}&189 \scriptsize{(68.5\%)}&64 \scriptsize{(23.2\%)}&94.50 \scriptsize{(34.2\%)}&71.5&1-9&190.50 \scriptsize{(69.0\%)}&9 \scriptsize{(3.3\%)}\\
\scriptsize{RT:K219E}&\scriptsize{NRTI}&\scriptsize{AZT'87}&262 \scriptsize{(0.7\%)}&192 \scriptsize{(73.3\%)}&43 \scriptsize{(16.4\%)}&74.75 \scriptsize{(28.5\%)}&51.5&1-9&192.25 \scriptsize{(73.4\%)}&5 \scriptsize{(1.9\%)}\\
\scriptsize{RT:T215F}&\scriptsize{NRTI}&\scriptsize{AZT'87}&257 \scriptsize{(0.7\%)}&215 \scriptsize{(83.7\%)}&19 \scriptsize{(7.4\%)}&41.25 \scriptsize{(16.1\%)}&37&1-4&222.75 \scriptsize{(86.7\%)}&7 \scriptsize{(2.7\%)}\\
\scriptsize{RT:A62V}&\scriptsize{NRTI}&\scriptsize{AZT'87}&251 \scriptsize{(0.6\%)}&147 \scriptsize{(58.6\%)}&81 \scriptsize{(32.3\%)}&114.50 \scriptsize{(45.6\%)}&58.5&1-27&147.50 \scriptsize{(58.8\%)}&11 \scriptsize{(4.4\%)}\\
\scriptsize{PR:I54V}&\scriptsize{PI}&\scriptsize{SQV'95}&243 \scriptsize{(0.6\%)}&182 \scriptsize{(74.9\%)}&33 \scriptsize{(13.6\%)}&62.52 \scriptsize{(25.7\%)}&43&1-6&191.48 \scriptsize{(78.8\%)}&11 \scriptsize{(4.5\%)}\\
\scriptsize{RT:L74V}&\scriptsize{NRTI}&\scriptsize{DDI'91}&242 \scriptsize{(0.6\%)}&200 \scriptsize{(82.6\%)}&17 \scriptsize{(7.0\%)}&38.25 \scriptsize{(15.8\%)}&36&1-3&207.75 \scriptsize{(85.8\%)}&4 \scriptsize{(1.7\%)}\\
\scriptsize{RT:K219N}&\scriptsize{NRTI}&\scriptsize{AZT'87}&238 \scriptsize{(0.6\%)}&92 \scriptsize{(38.7\%)}&127 \scriptsize{(53.4\%)}&161.00 \scriptsize{(67.6\%)}&23&1-113&81.00 \scriptsize{(34.0\%)}&4 \scriptsize{(1.7\%)}\\
\scriptsize{PR:L33F}&\scriptsize{PI}&\scriptsize{SQV'95}&230 \scriptsize{(0.6\%)}&117 \scriptsize{(50.9\%)}&92 \scriptsize{(40.0\%)}&126.12 \scriptsize{(54.8\%)}&70&1-10&114.88 \scriptsize{(49.9\%)}&11 \scriptsize{(4.8\%)}\\
\scriptsize{RT:K65R}&\scriptsize{NRTI}&\scriptsize{AZT'87}&225 \scriptsize{(0.6\%)}&170 \scriptsize{(75.6\%)}&19 \scriptsize{(8.4\%)}&50.88 \scriptsize{(22.6\%)}&42&1-2&187.12 \scriptsize{(83.2\%)}&13 \scriptsize{(5.8\%)}\\