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Protein HMM to DNA test #32

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ihh opened this issue Jul 10, 2018 · 2 comments
Open

Protein HMM to DNA test #32

ihh opened this issue Jul 10, 2018 · 2 comments
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@ihh
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ihh commented Jul 10, 2018

  • feasibility calculations (CPU, memory)
  • training
  • search
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ihh commented Jul 10, 2018

Standardize on E.coli test set (for later compatibility w/#33)
e.g. use https://pfam.xfam.org/family/ABC2_membrane (a bit long but a large family, try to find a shorter one?)

@ihh ihh added the test label Jul 21, 2018
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ihh commented Jul 21, 2018

Do #43 first

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