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Cell Detector

An image of cell nuclei before and after executing the Cell Detector addon.

An image of cell nuclei before and after executing the Cell Detector addon.

This add-on is designed to take a microscope image of fluorescently labeled cell nucleii and find the coordinates of every cell.

To use it, open a ClickPoints session and add the add-on CellDetector.py by clicking on the script icon.

Start the cell detector script by using F12 (or the key the script is connected to). All found cell nucleii will be labeled with a marker.

Attention

The Cell Detector won't work for cells which are too densely clustered. But ClickPoints allows you to review and adjust the results if some cells were not detected.