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hamming results confusing me #3

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RichardCorbett opened this issue Jul 12, 2017 · 0 comments
Open

hamming results confusing me #3

RichardCorbett opened this issue Jul 12, 2017 · 0 comments

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@RichardCorbett
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Hi there.

I'm trying out your tool and it looks very helpful, so thanks for this. However, I'm getting some confusting results when running with hamming distance.

When I run this this:
design_edit_metric_tags.py --tag-length=6 --edit-distance=3 --multiprocessing --hamming --output tags6all.txt
I get 66 indices returned.

But when I run this I get 96 indices:
design_edit_metric_tags.py --tag-length=6 --edit-distance=3 --multiprocessing

Shouldn't I get more indices returned when I use hamming distance?

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