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software.yaml
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software.yaml
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gemma2:
name: gemma2
type: software
github: https://github.com/fboehm/gemma2
description: Multivariate random effects for systems genetics studies
long_description: >
`gemma2` uses restricted maximum likelihood methods to infer variance components in a multivariate linear mixed effects model for QTL mapping.
date: 2019-10-01
version: 0.1.1
cran: https://cran.r-project.org/web/packages/gemma2/index.html
qtl2pleio:
name: qtl2pleio
type: software
github: https://github.com/fboehm/qtl2pleio
cran: https://cran.r-project.org/web/packages/qtl2pleio/index.html
description: Testing pleiotropy vs. separate QTL after Jiang & Zeng (1995)
long_description: >
`qtl2pleio` performs a d-variate, d-QTL scan over a genomic region of interest before calculating a likelihood ratio test statistic for the competing hypotheses of pleiotropy and separate QTL.
date: 2019-11-05
version: 1.2.3