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Thanks for this great piece of software!
I have one bug report and one request
slaMEM
slaMEM -l 17 refs.fa reads.fa -o outfolder/mems.txt
reads:
>read3 GTAATTACAGGACTTGTGGTTGGTTTTACGATAGCGACTGAACTGCCGAACTTTGTTTAATAATTACACGTTAATCTGGGACAAGCAAGCTGAAGACGCAGTAACAGTTGGTTCTTGCTGAAAGGACCAACCTATGACTTTCTGGTTTTGCCTGTTGTGAACAACGTTACAGTAAAAGGCGGCTTCGTGACTGCTGGTCGAAGAGCCAAATGGTCAACATTAGCATAGCTTGCTTCCTCTTTTTCGTTGCGGAGTTAGCAGGAGAACGTTATGTTTTTACCGAAGAAGGCGCAGTGTTTGCTTGACAATTTACCGTCGTGTCTTCGGTAACAGATATGCTTACCGCTATCCTAACCACCTCAATCACTGCCTTACGGACGTTAACCTAACGCAAATGCCACCAAATACATATGTAAGTCCTCTTAATGTTTGCATGCTTAATCTTTTGATTATTTCCTCTTTCTTTTCTATTTATTAATCCTGTGTCCTCGCCAACCGAATCAACATAAATACGTCAACGAATCAAATGTTGATCTCAAATATCTGTGTCCATGAAATTTCGATCGTAAAAACA >read4 GGCCTCTAAATTCGGTATCAAGTATTTGCTTCTCCACCGCCAAGCGCACATAAATTCTTTGCGAGTGTTGTTTGGCCACTTTTGGTAGCTCCTGTTTCTTGGCAATTTTGGCTGACACGTTCAGTTTCTTTGCTCCAACTTCGTAAGCAGTTAGTGTAGGCGTGCGGAGGCGTGCGCTACTCGCTACATCGTTGGTTCTACCACCCATATGCCATGGCGTCCTGTAGGTTTGCGCCTAATTACTCGAAGCGCTTTCATTTCTACGAAACGTTTTGGAATAATGTCAACTTGGGCATTGTTGAAACTACGGCTTCCTTAATGCTGACAACCTTGTTTAGTTGTTGTTCTTCCCTTCTTCCAGCATTTAATAACCAGCTTGTTTTAACTCCTTCGCTTTTTCGACTTTCTCCTTCCAGCACCGCAACGTTCTTTTAAGCTACAACGCTTTCTTGAAATCTTCTCGTCATAAA
refs:
>1^1000^1484 AAAGTAATGCCTCTACGTCAGTCGGAACAATGTCGTCGTGTAACTCGACGATCTTAGGAGCTACTAAGGAGAGTCTGTAGGGAACCGACTGGGAAGGTGCCACAAGTTTTCTCTACTACTCCGTCTCCTAAAACAACTCCAAGTGGAAGGTCTGTGGGTTTTTGAGTATAGTCCGTATCTAGACCCAAAAGGGCTTACCTTCGCAATGAAAGAATATCCTTATAGACACGAACGGGAAGAACGGAATCGTTATTAATGACGTCGTACAACGTTTTCCAAGTTCTCCTCTTCCTCCGGATTCGGTTTGGGTTATCTCAACTAGTCCTTTCAAAGACATTGGAGAGTTTCACCTTCCCGTTAAGGTAGAACCCTCAGCATGTTTCACCCCCGGTGACCACTCAGTTACGGAATGTTTTTAAGCCACCTCAGCTAGTGTTCCGAGAGGTGACAGCGACGACGTCCACGTTTGGACTTGTTATCATAA >1^6337^6813 CATCCTAACATGTTTAGGAACTTCCCCCGAACGTTCGACTCTGAGACACCCCAGGGACCGTACTCTAACTACCTACCTAGTACCCATAGAGAAGTCTTTTGACTTCCAGGCCCTACCACGAGAGGTCTAGTCGAACCTTTACAGGTACTAAAGGTATGTCTACTTTAACTTGTGGAACACCAACTTCTCAACCACTTCTTCTCCCTTCTCACAAACCTACGACATCTTTGATAGTAGTGTTGGTTCAGATATTCATCGTCTGCAGAGTCAGTAAAGTCCTTTGACCAAGGACCCAAACCTTTCCGTATGTGAGAGTAGTTGTTCTGAGAGTACCTTCGTCTACAGGTAATGTTCAGACATTCTCTTACCTTTCTTCACTAGGGTAGATTTCCCACAGACTACCGTCCCCCCTCTACGGTAGGAGTGATGTCACCATATAAGAAGTTACCCTAGTATGACTCAGGTCCCCCACTATC
The text was updated successfully, but these errors were encountered:
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Thanks for this great piece of software!
I have one bug report and one request
slaMEM
? It matters when testing builds with travis.reads:
refs:
The text was updated successfully, but these errors were encountered: