- A Python package that lets you interrogate the ENA using the BIGSI web portal to interrogate the bacterial and viral pathogen genetic data in the ENA/SRA as of late 2017.
"Want to know how many #tuberculosis sequences have been deposited containing the canonical mutation conferring resistance to rifampicin? Easy." SOURCE: https://twitter.com/philipwfowler/status/1035496483745935361 Zam Iqbal and his group have developed an index for all the bacterial and viral pathogen genetic data in the ENA/SRA as of late 2017 which is searchable. It is called BIGSI and you can try it here (the resemblance to an early Google is not, I suspect, a coincidence) and you can find the preprint here.