README.md

iravnet

intron retention associated variant detection project

Dependency

Binary programs

samtools, SSW Library

Python

pysam, annot_utils, intron_retention_utils

Install

wget https://github.com/friend1ws/iravnet/archive/v0.1.0b15.tar.gz
tar zxvf v0.1.0b15.tar.gz
cd iravnet-0.1.0b15
python3 -m pip install .

Tutorial

See this page