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CITATION.cff
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CITATION.cff
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# -----------------------------------------------------------
# CITATION file created with {cffr} R package, v1.0.0
# See also: https://docs.ropensci.org/cffr/
# -----------------------------------------------------------
cff-version: 1.2.0
message: 'To cite package "fundiversity" in publications use:'
type: software
license: GPL-3.0-only
title: 'fundiversity: Easy Computation of Functional Diversity Indices'
version: 1.1.1
doi: 10.5281/zenodo.4761754
abstract: Computes six functional diversity indices. These are namely, Functional
Divergence (FDiv), Function Evenness (FEve), Functional Richness (FRic), Functional
Richness intersections (FRic_intersect), Functional Dispersion (FDis), and Rao's
entropy (Q) (reviewed in Vill茅ger et al. 2008 <https://doi.org/10.1890/07-1206.1>).
Provides efficient, modular, and parallel functions to compute functional diversity
indices (Greni茅 & Gruson 2023 <https://doi.org/10.1111/ecog.06585>).
authors:
- family-names: Greni茅
given-names: Matthias
email: matthias.grenie@gmail.com
orcid: https://orcid.org/0000-0002-4659-7522
- family-names: Gruson
given-names: Hugo
orcid: https://orcid.org/0000-0002-4094-1476
preferred-citation:
type: manual
title: 'fundiversity: Easy Computation of Functional Diversity Indices'
authors:
- family-names: Greni茅
given-names: Matthias
email: matthias.grenie@gmail.com
orcid: https://orcid.org/0000-0002-4659-7522
- family-names: Gruson
given-names: Hugo
orcid: https://orcid.org/0000-0002-4094-1476
year: '2024'
notes: R package version 1.1.1
url: https://CRAN.R-project.org/package=fundiversity
doi: 10.5281/zenodo.4761754
repository: https://CRAN.R-project.org/package=fundiversity
repository-code: https://github.com/funecology/fundiversity
url: https://funecology.github.io/fundiversity/
contact:
- family-names: Greni茅
given-names: Matthias
email: matthias.grenie@gmail.com
orcid: https://orcid.org/0000-0002-4659-7522
keywords:
- biodiversity
- biodiversity-indicators
- biodiversity-informatics
- functional-diversity
- functional-ecology
- functional-trait
- functional-traits
- r
- r-package
- trait
- trait-based
- traits
references:
- type: article
title: 'fundiversity: a modular R package to compute functional diversity indices'
authors:
- family-names: Greni茅
given-names: Matthias
- family-names: Gruson
given-names: Hugo
journal: Ecography
year: '2023'
doi: 10.1111/ecog.06585
volume: '2023'
issue: '3'
start: e06585
- type: software
title: 'R: A Language and Environment for Statistical Computing'
notes: Depends
url: https://www.R-project.org/
authors:
- name: R Core Team
institution:
name: R Foundation for Statistical Computing
address: Vienna, Austria
year: '2024'
version: '>= 2.10'
- type: software
title: future.apply
abstract: 'future.apply: Apply Function to Elements in Parallel using Futures'
notes: Imports
url: https://future.apply.futureverse.org
repository: https://CRAN.R-project.org/package=future.apply
authors:
- family-names: Bengtsson
given-names: Henrik
email: henrikb@braju.com
orcid: https://orcid.org/0000-0002-7579-5165
year: '2024'
- type: software
title: geometry
abstract: 'geometry: Mesh Generation and Surface Tessellation'
notes: Imports
url: https://davidcsterratt.github.io/geometry/
repository: https://CRAN.R-project.org/package=geometry
authors:
- family-names: Habel
given-names: Kai
- family-names: Grasman
given-names: Raoul
- family-names: Gramacy
given-names: Robert B.
- family-names: Mozharovskyi
given-names: Pavlo
- family-names: Sterratt
given-names: David C.
email: david.c.sterratt@ed.ac.uk
orcid: https://orcid.org/0000-0001-9092-9099
year: '2024'
- type: software
title: Matrix
abstract: 'Matrix: Sparse and Dense Matrix Classes and Methods'
notes: Imports
url: https://R-forge.R-project.org/tracker/?atid=294&group_id=61
repository: https://CRAN.R-project.org/package=Matrix
authors:
- family-names: Bates
given-names: Douglas
orcid: https://orcid.org/0000-0001-8316-9503
- family-names: Maechler
given-names: Martin
email: mmaechler+Matrix@gmail.com
orcid: https://orcid.org/0000-0002-8685-9910
- family-names: Jagan
given-names: Mikael
orcid: https://orcid.org/0000-0002-3542-2938
year: '2024'
- type: software
title: vegan
abstract: 'vegan: Community Ecology Package'
notes: Imports
url: https://github.com/vegandevs/vegan
repository: https://CRAN.R-project.org/package=vegan
authors:
- family-names: Oksanen
given-names: Jari
email: jhoksane@gmail.com
- family-names: Simpson
given-names: Gavin L.
email: ucfagls@gmail.com
- family-names: Blanchet
given-names: F. Guillaume
- family-names: Kindt
given-names: Roeland
- family-names: Legendre
given-names: Pierre
- family-names: Minchin
given-names: Peter R.
- family-names: O'Hara
given-names: R.B.
- family-names: Solymos
given-names: Peter
- family-names: Stevens
given-names: M. Henry H.
- family-names: Szoecs
given-names: Eduard
- family-names: Wagner
given-names: Helene
- family-names: Barbour
given-names: Matt
- family-names: Bedward
given-names: Michael
- family-names: Bolker
given-names: Ben
- family-names: Borcard
given-names: Daniel
- family-names: Carvalho
given-names: Gustavo
- family-names: Chirico
given-names: Michael
- family-names: De Caceres
given-names: Miquel
- family-names: Durand
given-names: Sebastien
- family-names: Evangelista
given-names: Heloisa Beatriz Antoniazi
- family-names: FitzJohn
given-names: Rich
- family-names: Friendly
given-names: Michael
- family-names: Furneaux
given-names: Brendan
- family-names: Hannigan
given-names: Geoffrey
- family-names: Hill
given-names: Mark O.
- family-names: Lahti
given-names: Leo
- family-names: McGlinn
given-names: Dan
- family-names: Ouellette
given-names: Marie-Helene
- family-names: Ribeiro Cunha
given-names: Eduardo
- family-names: Smith
given-names: Tyler
- family-names: Stier
given-names: Adrian
- family-names: Ter Braak
given-names: Cajo J.F.
- family-names: Weedon
given-names: James
year: '2024'
- type: software
title: future
abstract: 'future: Unified Parallel and Distributed Processing in R for Everyone'
notes: Suggests
url: https://future.futureverse.org
repository: https://CRAN.R-project.org/package=future
authors:
- family-names: Bengtsson
given-names: Henrik
email: henrikb@braju.com
orcid: https://orcid.org/0000-0002-7579-5165
year: '2024'
- type: software
title: knitr
abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
notes: Suggests
url: https://yihui.org/knitr/
repository: https://CRAN.R-project.org/package=knitr
authors:
- family-names: Xie
given-names: Yihui
email: xie@yihui.name
orcid: https://orcid.org/0000-0003-0645-5666
year: '2024'
- type: software
title: memoise
abstract: 'memoise: ''Memoisation'' of Functions'
notes: Suggests
url: https://memoise.r-lib.org
repository: https://CRAN.R-project.org/package=memoise
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@rstudio.com
- family-names: Hester
given-names: Jim
- family-names: Chang
given-names: Winston
email: winston@rstudio.com
- family-names: M眉ller
given-names: Kirill
email: krlmlr+r@mailbox.org
- family-names: Cook
given-names: Daniel
email: danielecook@gmail.com
year: '2024'
- type: software
title: rmarkdown
abstract: 'rmarkdown: Dynamic Documents for R'
notes: Suggests
url: https://pkgs.rstudio.com/rmarkdown/
repository: https://CRAN.R-project.org/package=rmarkdown
authors:
- family-names: Allaire
given-names: JJ
email: jj@posit.co
- family-names: Xie
given-names: Yihui
email: xie@yihui.name
orcid: https://orcid.org/0000-0003-0645-5666
- family-names: Dervieux
given-names: Christophe
email: cderv@posit.co
orcid: https://orcid.org/0000-0003-4474-2498
- family-names: McPherson
given-names: Jonathan
email: jonathan@posit.co
- family-names: Luraschi
given-names: Javier
- family-names: Ushey
given-names: Kevin
email: kevin@posit.co
- family-names: Atkins
given-names: Aron
email: aron@posit.co
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
- family-names: Cheng
given-names: Joe
email: joe@posit.co
- family-names: Chang
given-names: Winston
email: winston@posit.co
- family-names: Iannone
given-names: Richard
email: rich@posit.co
orcid: https://orcid.org/0000-0003-3925-190X
year: '2024'
- type: software
title: testthat
abstract: 'testthat: Unit Testing for R'
notes: Suggests
url: https://testthat.r-lib.org
repository: https://CRAN.R-project.org/package=testthat
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
year: '2024'
version: '>= 3.0.0'
- type: software
title: withr
abstract: 'withr: Run Code ''With'' Temporarily Modified Global State'
notes: Suggests
url: https://withr.r-lib.org
repository: https://CRAN.R-project.org/package=withr
authors:
- family-names: Hester
given-names: Jim
- family-names: Henry
given-names: Lionel
email: lionel@posit.co
- family-names: M眉ller
given-names: Kirill
email: krlmlr+r@mailbox.org
- family-names: Ushey
given-names: Kevin
email: kevinushey@gmail.com
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
- family-names: Chang
given-names: Winston
year: '2024'