planemo.commands.cmd_autoupdate module .. automodule:: planemo.commands.cmd_autoupdate
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_ci_find_repos module .. automodule:: planemo.commands.cmd_ci_find_repos
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planemo.commands.cmd_ci_find_tools module .. automodule:: planemo.commands.cmd_ci_find_tools
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:undoc-members:
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planemo.commands.cmd_ci_setup module .. automodule:: planemo.commands.cmd_ci_setup
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_clone module .. automodule:: planemo.commands.cmd_clone
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_build module .. automodule:: planemo.commands.cmd_conda_build
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_env module .. automodule:: planemo.commands.cmd_conda_env
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_init module .. automodule:: planemo.commands.cmd_conda_init
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_conda_install module .. automodule:: planemo.commands.cmd_conda_install
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:undoc-members:
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planemo.commands.cmd_conda_search module .. automodule:: planemo.commands.cmd_conda_search
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:undoc-members:
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planemo.commands.cmd_config_init module .. automodule:: planemo.commands.cmd_config_init
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_container_register module .. automodule:: planemo.commands.cmd_container_register
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:undoc-members:
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planemo.commands.cmd_create_alias module .. automodule:: planemo.commands.cmd_create_alias
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_create_gist module .. automodule:: planemo.commands.cmd_create_gist
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:undoc-members:
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planemo.commands.cmd_database_create module .. automodule:: planemo.commands.cmd_database_create
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:undoc-members:
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planemo.commands.cmd_database_delete module .. automodule:: planemo.commands.cmd_database_delete
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:undoc-members:
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planemo.commands.cmd_database_list module .. automodule:: planemo.commands.cmd_database_list
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_delete_alias module .. automodule:: planemo.commands.cmd_delete_alias
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_docker_build module .. automodule:: planemo.commands.cmd_docker_build
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_docker_shell module .. automodule:: planemo.commands.cmd_docker_shell
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_dockstore_init module .. automodule:: planemo.commands.cmd_dockstore_init
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_docs module .. automodule:: planemo.commands.cmd_docs
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_lint module .. automodule:: planemo.commands.cmd_lint
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_list_alias module .. automodule:: planemo.commands.cmd_list_alias
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_list_invocations module .. automodule:: planemo.commands.cmd_list_invocations
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_list_repos module .. automodule:: planemo.commands.cmd_list_repos
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_merge_test_reports module .. automodule:: planemo.commands.cmd_merge_test_reports
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_mull module .. automodule:: planemo.commands.cmd_mull
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_mulled_init module .. automodule:: planemo.commands.cmd_mulled_init
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_normalize module .. automodule:: planemo.commands.cmd_normalize
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_open module .. automodule:: planemo.commands.cmd_open
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:undoc-members:
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planemo.commands.cmd_profile_create module .. automodule:: planemo.commands.cmd_profile_create
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:undoc-members:
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planemo.commands.cmd_profile_delete module .. automodule:: planemo.commands.cmd_profile_delete
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_profile_list module .. automodule:: planemo.commands.cmd_profile_list
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:undoc-members:
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planemo.commands.cmd_project_init module .. automodule:: planemo.commands.cmd_project_init
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_pull_request module .. automodule:: planemo.commands.cmd_pull_request
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_rerun module .. automodule:: planemo.commands.cmd_rerun
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_run module .. automodule:: planemo.commands.cmd_run
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:undoc-members:
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planemo.commands.cmd_serve module .. automodule:: planemo.commands.cmd_serve
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:undoc-members:
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planemo.commands.cmd_share_test module .. automodule:: planemo.commands.cmd_share_test
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_build module .. automodule:: planemo.commands.cmd_shed_build
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_create module .. automodule:: planemo.commands.cmd_shed_create
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:undoc-members:
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planemo.commands.cmd_shed_diff module .. automodule:: planemo.commands.cmd_shed_diff
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:undoc-members:
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planemo.commands.cmd_shed_download module .. automodule:: planemo.commands.cmd_shed_download
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:undoc-members:
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planemo.commands.cmd_shed_init module .. automodule:: planemo.commands.cmd_shed_init
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:undoc-members:
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planemo.commands.cmd_shed_lint module .. automodule:: planemo.commands.cmd_shed_lint
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_serve module .. automodule:: planemo.commands.cmd_shed_serve
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_shed_test module .. automodule:: planemo.commands.cmd_shed_test
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:undoc-members:
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planemo.commands.cmd_shed_update module .. automodule:: planemo.commands.cmd_shed_update
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:undoc-members:
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planemo.commands.cmd_shed_upload module .. automodule:: planemo.commands.cmd_shed_upload
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_syntax module .. automodule:: planemo.commands.cmd_syntax
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:undoc-members:
:show-inheritance:
planemo.commands.cmd_test module .. automodule:: planemo.commands.cmd_test
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planemo.commands.cmd_test_reports module .. automodule:: planemo.commands.cmd_test_reports
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:undoc-members:
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planemo.commands.cmd_tool_init module .. automodule:: planemo.commands.cmd_tool_init
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planemo.commands.cmd_training_fill_data_library module .. automodule:: planemo.commands.cmd_training_fill_data_library
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planemo.commands.cmd_training_generate_from_wf module .. automodule:: planemo.commands.cmd_training_generate_from_wf
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:undoc-members:
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planemo.commands.cmd_training_init module .. automodule:: planemo.commands.cmd_training_init
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:undoc-members:
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planemo.commands.cmd_upload_data module .. automodule:: planemo.commands.cmd_upload_data
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planemo.commands.cmd_workflow_convert module .. automodule:: planemo.commands.cmd_workflow_convert
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planemo.commands.cmd_workflow_edit module .. automodule:: planemo.commands.cmd_workflow_edit
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planemo.commands.cmd_workflow_job_init module .. automodule:: planemo.commands.cmd_workflow_job_init
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planemo.commands.cmd_workflow_lint module .. automodule:: planemo.commands.cmd_workflow_lint
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:undoc-members:
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planemo.commands.cmd_workflow_test_init module .. automodule:: planemo.commands.cmd_workflow_test_init
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planemo.commands.cmd_workflow_test_on_invocation module .. automodule:: planemo.commands.cmd_workflow_test_on_invocation
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planemo.commands.cmd_workflow_upload module .. automodule:: planemo.commands.cmd_workflow_upload
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:undoc-members:
:show-inheritance:
.. automodule:: planemo.commands
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