An error occurred while running

[fengcong3]

But I know why

HDF5-DIAG: Error detected in HDF5 (1.8.18) thread 0:
#000: /software/minia-v3.2.1-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dio.c line 173 in H5Dread(): can't read data
major: Dataset
minor: Read failed
#1: /software/minia-v3.2.1-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dio.c line 554 in H5D__read(): can't read data
major: Dataset
minor: Read failed
#2: /software/minia-v3.2.1-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dchunk.c line 1875 in H5D__chunk_read(): unable to read raw data chunk
major: Low-level I/O
minor: Read failed
#3: /software/minia-v3.2.1-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dchunk.c line 2905 in H5D__chunk_lock(): data pipeline read failed
major: Data filters
minor: Filter operation failed
#4: /software/minia-v3.2.1-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5Z.c line 1372 in H5Z_pipeline(): filter returned failure during read
major: Data filters
minor: Read failed
#5:/software/minia-v3.2.1-Source/thirdparty/gatb-core/gatb-core/thirdparty/hdf5/src/H5Zdeflate.c line 125 in H5Z_filter_deflate(): inflate() failed
major: Data filters
minor: Unable to initialize object

[rchikhi]

But I know why

Do you know why? :)

[xiefumin1]

I think i know why,
the config may set like this:
1.fq.gz\r\n
2.fq.gz\r\n
but it should be like this；
1.fq.gz\n
2.fq.gz\n

[rchikhi]

ah nice, thanks!