Gene finding in eukaryotic genomes by GeneMark-ETP
GeneMark-ETP: Automatic Gene Finding in Eukaryotic Genomes in Consistence with Extrinsic Data
Tomas Bruna, Alexandre Lomsadze, Mark Borodovsky
publication in preparation
bioRxiv
Georgia Institute of Technology, Atlanta, Georgia, USA
The repository with documentation of experiments, data, and results for the GeneMark-ETP project is available at https://github.com/gatech-genemark/GeneMark-ETP-exp
Usage:
gmetp.pl --cores 32 --cfg input.cfg
Examples of input configuration files can be found at https://github.com/gatech-genemark/GeneMark-ETP-expi
GeneMark-ETP is distributed under Creative Commons Attribution NonCommercial ShareAlike 4.0 License. See the full text of the license.
Third-party tools are in the folder "tools." These tools are distributed under the licensing terms of the respective license holders. For details, see the installation instructions and corresponding references.