This test suite includes phylogenies from Crowl et al., 2014. This table summarizes the phylogenies and phyloreferences currently built.
Plastid ML tree | PPR ML tree | Plastid + PPR ML tree | |
---|---|---|---|
Tree image | URL | URL | URL |
Nexus file | URL | URL | URL |
Clade C1 | :has_Descendant value :Campanula_latifolia and :excludes_lineage_to value :Trachelium_caeruleum | Missing Campanula latifolia | :has_Descendant value :Campanula_latifolia and :excudes_lineage_to value :Trachelium_caeruleum |
Clade D | :has_Descendant value :Wahlenbergia_angustifolia and :excludes_lineage_to value :Heterochaenia_ensifolia | Missing Wahlenbergia angustifolia and Heterochaenia ensifolia | :has_Descendant value :Wahlenbergia_angustifolia and :excludes_lineage_to value :Heterochaenia_ensifolia |
Clade G | :has_Descendant value :Campanula_erinus and :excludes_lineage_to value :Campanula_drabifolia | :has_Child some (:excludes_lineage_of value :Campanula_drabifolia) and :has_Child value :Campanula_erinus_AC107 | :has_Descendant value :Campanula_erinus and :excludes_lineage_to value :Campanula_drabifolia |
Clade H | Existing phyloreference doesn't resolve, need to use the same trick as clade G. | Contains both species, but Campanula pelviformis has shifted enough that this clade now incorporates almost the entire tree. | :has_Child some (:has_Descendant value :Campanula_laciniata and :excludes_lineage_to value :Campanula_pelviformis) and :has_Child some (:has_Descendant value :Campanula_pelviformis and :excludes_lineage_to value :Campanula_laciniata) |
Clade H by branch | Existing phyloreference doesn't resolve, need to use the same trick as clade G. | Contains both species, but Campanula pelviformis has shifted enough that this clade now incorporates almost the entire tree. | :has_Descendant value :Campanula_laciniata and :excludes_lineage_to value :Campanula_pelviformis |