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DESCRIPTION
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DESCRIPTION
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Type: Package
Package: gDRcore
Title: Processing functions and interface to process and analyze drug
dose-response data
Version: 1.3.2
Date: 2024-06-04
Authors@R: c(
person("Bartosz", "Czech", , "bartosz.czech@contractors.roche.com", role = "aut",
comment = c(ORCID = "0000-0002-9908-3007")),
person("Arkadiusz", "Gladki", role=c("cre", "aut"), email="gladki.arkadiusz@gmail.com",
comment = c(ORCID = "0000-0002-7059-6378")),
person("Marc", "Hafner", role = "aut",
comment = c(ORCID = "0000-0003-1337-7598")),
person("Pawel", "Piatkowski", role = "aut"),
person("Natalia", "Potocka", role = "aut"),
person("Dariusz", "Scigocki", role = "aut"),
person("Janina", "Smola", role = "aut"),
person("Sergiu", "Mocanu", role = "aut"),
person("Marcin", "Kamianowski", role="aut"),
person("Allison", "Vuong", role = "aut")
)
Description: This package contains core functions to process and analyze drug response data. The package provides tools for normalizing, averaging,
and calculation of gDR metrics data. All core functions are wrapped into the pipeline function allowing analyzing the data in a straightforward way.
License: Artistic-2.0
Depends:
R (>= 4.2)
Imports:
BumpyMatrix,
BiocParallel,
checkmate,
futile.logger,
gDRutils (>= 1.1.14),
MultiAssayExperiment,
purrr,
stringr,
S4Vectors,
SummarizedExperiment,
data.table
Suggests:
BiocStyle,
gDRstyle (>= 1.1.5),
gDRimport (>= 1.1.9),
gDRtestData (>= 1.1.10),
IRanges,
knitr,
pkgbuild,
qs,
testthat,
yaml
VignetteBuilder:
knitr
URL: https://github.com/gdrplatform/gDRcore, https://gdrplatform.github.io/gDRcore/
BugReports: https://github.com/gdrplatform/gDRcore/issues
biocViews: Software, ShinyApps
ByteCompile: TRUE
DeploySubPath: gDRcore
Encoding: UTF-8
LazyLoad: yes
NeedsCompilation: yes
RoxygenNote: 7.3.1
Roxygen: list(markdown = TRUE)
SwitchrLibrary: gDRcore