Pinned repositories

  1. genenetwork

    GeneNetwork (1st generation)

    HTML 16 6

  2. genenetwork2

    GeneNetwork (2nd generation)

    JavaScript 12 18

  • GeneNetwork (2nd generation)

    JavaScript 12 18 AGPL-3.0 Updated Aug 10, 2018
  • GeneNetwork/JupyterLabs/Arvados

    1 AGPL-3.0 Updated Aug 6, 2018
  • Genome-wide Efficient Mixed Model Association

    C++ 43 GPL-3.0 Updated Jul 26, 2018
  • Deployment configuration, scripts and docs

    Shell Updated Apr 21, 2018
  • Metadata editor

    AGPL-3.0 Updated Apr 5, 2018
  • C 1 GPL-2.0 Updated Mar 23, 2018
  • GeneNetwork (1st generation)

    HTML 16 6 Updated Feb 1, 2018
  • GSoC

    Forked from OBF/GSoC

    OBF Google Summer of Code

    23 Updated Jan 20, 2018
  • Shell Updated Dec 19, 2017
  • GeneNetwork REST server

    Elixir 1 3 AGPL-3.0 Updated Oct 3, 2017
  • shunit2

    Forked from kward/shunit2

    Automatically exported from code.google.com/p/shunit2

    Shell 1 81 Updated Jul 4, 2017
  • WARNING: REPO HAS MOVED TO GITLAB!

    Scheme 4 1 GPL-3.0 Updated Jul 4, 2017
  • WARNING: REPO HAS MOVED TO GITLAB!

    Scheme 3 1 GPL-3.0 Updated May 14, 2017
  • Execution daemon for gn_server

    Elixir 1 AGPL-3.0 Updated May 6, 2017
  • WARNING: REPO HAS MOVED TO GITLAB!

    JavaScript 229 Updated Mar 17, 2017
  • 1 Updated Nov 4, 2016
  • Performant version of pylmm for Genenetwork.org

    Python AGPL-3.0 Updated Nov 2, 2016
  • Interactive web-based genome browser.

    JavaScript 65 BSD-2-Clause Updated Oct 12, 2016
  • Maintenance and conversion scripts for GeneNetwork

    Ruby AGPL-3.0 Updated Oct 7, 2016
  • Correlated Trait Locus (CTL) mapping

    R 2 GPL-3.0 Updated Sep 20, 2016
  • A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Future development will revolve around critical extensions to the core file format (multiallelic variants, dosage, phase).

    C 47 GPL-3.0 Updated Aug 16, 2016
  • Git source repo on a diet

    JavaScript 1 AGPL-3.0 Updated May 31, 2016
  • Those bad software packages with a non-free license that can't go upstream

    Scheme 2 GPL-3.0 Updated Apr 4, 2016
  • Piddle as used by Genenetwork

    Python Updated Feb 25, 2016
  • A fast and lightweight python-based linear mixed-model solver for use in genome-wide association studies.

    Python 15 Updated Feb 20, 2016
  • WGCNA

    Forked from cran/WGCNA

    GN2 adaption of the CRAN R package repository. WGCNA — Weighted Correlation Network Analysis. Homepage: http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/

    R 29 Updated Dec 31, 2015
  • Design/architecture documents for Genenetwork

    CC0-1.0 Updated Dec 28, 2015
  • GeneNetwork2 development server installation

    R 2 Updated Sep 19, 2015
  • Python Updated Aug 18, 2015
  • Cluster - Tanner

    Updated Aug 17, 2015