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Few queries #14

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Agenetics opened this issue Apr 28, 2023 · 2 comments
Closed

Few queries #14

Agenetics opened this issue Apr 28, 2023 · 2 comments

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@Agenetics
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Hi. Thanks for the nice software. I have 2 queries.

  1. Is there a way to ignore C->T and G->A SNPs in the tool's prediction? That will be invaluable for ancient DNA.
  2. Is there a way to run this on multiple bam files in one command?

Thank you.

@6bass6-010
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Hi,

Apologies for the late response.

  1. That function has not been implemented yet; however, I do see how it could be a useful feature. I will try to have it implemented in the next version.
  2. Certainly, if you collect you bam files in a single directory and specify that directory as the input it will automatically analyze all bam files present there.

Best wishes,
Arwin

@6bass6
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6bass6 commented Feb 21, 2024

Hi. Thanks for the nice software. I have 2 queries.

  1. Is there a way to ignore C->T and G->A SNPs in the tool's prediction? That will be invaluable for ancient DNA.
  2. Is there a way to run this on multiple bam files in one command?

Thank you.

The funcionality for aDNA is now implemented in v3.2.1 that was just released

@6bass6 6bass6 closed this as completed Feb 21, 2024
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3 participants