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JASEN crashes when there are multiple files with identical sample-id in input csv #59

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mhkc opened this issue Jun 15, 2022 · 1 comment
Open

JASEN crashes when there are multiple files with identical sample-id in input csv #59

mhkc opened this issue Jun 15, 2022 · 1 comment
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@ryanjameskennedy
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good first issue Good issue to tackle for new contributors must WIP Work in progress
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Pipeline efficiency

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@mhkc
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mhkc commented Jun 15, 2022

JASEN crashes when there are multiple files with identical sample-id in input csv. This because it causes miss-pairings of assemblies and assembly indexes.

Could be prevented by a "validate input" step
@ryanjameskennedy
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Similar issue to #60

@ryanjameskennedy ryanjameskennedy added the good first issue Good issue to tackle for new contributors label Feb 11, 2023
@LordRust LordRust added this to the Release 1 milestone Mar 2, 2023
@ryanjameskennedy ryanjameskennedy added the WIP Work in progress label Mar 8, 2023
@ryanjameskennedy ryanjameskennedy self-assigned this Mar 8, 2023
@ryanjameskennedy ryanjameskennedy modified the milestones: Release 1, Release 2 May 10, 2023
@ryanjameskennedy ryanjameskennedy linked a pull request Sep 5, 2023 that will close this issue
Input csv bug fixes regarding sample id #173
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6 tasks
@ryanjameskennedy ryanjameskennedy removed a link to a pull request Feb 14, 2024
Input csv bug fixes regarding sample id #173
Closed
6 tasks
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