Updated example job scripts

docs/source/index.rst

@@ -71,6 +71,7 @@ with Spack, as well as how to use Spack to install GCHP's dependencies if needed
 
    supplement/rundir-config.rst
    supplement/config-files.rst
+   supplement/job-script-examples.rst
    supplement/spack.rst
    supplement/containers.rst
    supplement/plotting-output.rst

docs/source/supplement/job-script-examples.rst

@@ -0,0 +1,40 @@
+
+Example Job Scripts
+===================
+
+These are example job scripts for GCHP batch jobs. These examples are taken from the :file:`runScriptSamples/`. See that
+directory for more information and examples.
+
+.. important::
+   These are examples. You need to write your own job scripts, but these are good templates to start from.
+
+Please share yours! Submit a pull-request on GitHub.
+
+Examples for Various Schedulers
+-------------------------------
+
+These are simple examples for various schedulers. They are set up to use 2 nodes, and are suitable for C48 or C90 resolution.
+
+* For PBS-based clusters: :download:`simple_batch_job.pbs.sh <../../../run/runScriptSamples/simple_examples/simple_batch_job.pbs.sh>`
+* For Slurm-based clusters: :download:`simple_batch_job.slurm.sh <../../../run/runScriptSamples/simple_examples/simple_batch_job.slurm.sh>`
+* For LSF-based clusters: :download:`simple_batch_job.lsf.sh <../../../run/runScriptSamples/simple_examples/simple_batch_job.lsf.sh>`
+
+Examples for Various HPCs
+-------------------------
+
+These are simple examples for various systems. They are set up to use 2 nodes, and are suitable for C48 or C90 resolution.
+
+* For Pleiades (NASA Advanced Supercomputing): :download:`simple_batch_job.pbs.sh <../../../run/runScriptSamples/simple_examples/simple_batch_job.pbs.sh>`
+* For Cannon (Harvard): :download:`simple_batch_job.slurm.sh <../../../run/runScriptSamples/simple_examples/simple_batch_job.slurm.sh>`
+* For Compute1 (WUSTL): :download:`simple_batch_job.lsf.sh <../../../run/runScriptSamples/simple_examples/simple_batch_job.lsf.sh>`
+
+Operational Examples
+--------------------
+
+These are "full-fledged" examples. They are more complicated, but they demonstrate what
+operational GCHP batch jobs look like. Initially, it's probably best to err on the side of
+simplicity, and build your own automated functionality with time. 
+
+* Auto-requeuing C360 simulation (Compute1): :download:`c360_requeuing.sh <../../../run/runScriptSamples/operational_examples/wustl_gcst/c360_requeuing.sh>`
+* 1 month benchmark simulation (Cannon): :download:`gchp.benchmark.run <../../../run/runScriptSamples/operational_examples/harvard_gcst/gchp.benchmark.run>`
+