avihepadna-core.aln.faa

>NC_001344|DHBV
MWNLRITPLSFGAACQGIFTSTLLLSALTVPLVCTIVYDSCLYMDINASRALANVYDLPDDFFPKIDDLVRDAKDALEPY
WKSDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGYLIQHEEAEEIPLGDLFKHQ-EERIVSFQ
PDYPITARIA-HLKAYAKINEESLDRARRLLWWHYNCLLWGEANVTNYISRLRTWLSTPEKYRGRDAPTIEAITRPIQAA
QGGRKTSSGTRK-----PRGLEPRRRKV--KTTVVYGRRRSKSRERRAPSPQRAGSPLPRSSSSHHRSPSPRK*-----
>ehbv-avi.28-alauda|polyprotein 
MRSLRLHTSPYRAVAKGI-LTICLPLLCAAPLVCTSVYDSALYMDANVPCALANVFDLPDDFFPSMENLVRDAKQALEPL
LLETRIKKHVILASKFLDTVEAFWQTTQRIEQVAGVLIQHNPQDTPPVPEGYHLDYEEASEIGLHDIFNSQ-DERITSFD
PDYPVLGRTYIHLKVYSKLNQQSLDRAMKFLWWHYNCLVWGEASVTDYISRLRTWLSTPERYRGKDAPATEQIIRPVRVA
AASSGGDLCSRR---SGRSGFQPRRRKV--KTTVVCRQKRSESRDKSRECPGTHGSPVQGPSGSGRGSPLLRG------
>ehbv-avi.9-melopsittacus|polyprotein 
LWSLRLHTSPYGAARQGI-LTISLLLLFAVPLVCTSVYDSILYMDINAQRALSNMFDLPIDFFPSIEDLIRYTKDAIEPF
TKEGSLKKHVVLATHFLDLVEGFWATTRGMRDVAAALRPLVPAELEPIPEGNYTTKSELEELPVDGLFNYQ-EELIRNRD
PNYPLVGRVYTHLIVYAKLNEQSLDNARRLLWWHSNCLIWGEPNVTDYISRLRTWLSTPEKYRGRDAPTIEASTRPIRVA
RAGQKGSQGIRK-----SCGLEFRRRKD--KTSVSYGRKRSKSRSRRPSSEGRGSNQCVGSPSPLPSLSRGGSPHSRR*
>ehbv-avi.10-melopsittacus|polyprotein 
MWSLRLHTSPFGAACQGI-LTISLLLLFAVPLVCTSVCDSALYMDINAQRVLSNVFDLPTDFFPSIEDLIRDTKDAIEPF
IKEGSIKKHVVLATHFLDLVEDFWATTRGMHDVAAALRHLVPEDLEPIPEGNYTTK?*LQELPVDGLFHYQ-EELIRNKD
PNYPVVGRVC?DVSCSSTTDEQSLDNAHRLLWWHCNCLI*GEPNVTDCISRLRTWLSTPEKYRGRDAPTIEAITRPIRVA
RAGPQSSQKNRK-----PRGLKLRRRKV--KTSITYRRKRSKSRSRRPSSEGKGSYQRAGSPSPPSSTTRGGSPSSRR*
>ehbv-avi.11-tyto|polyprotein 
MCPLRIHPSPYGARTQGNFTKYLLLLLVSVPCIL-CDLNSSLYMDPTVKRAFSSVYDLPDDFFPDIKVLLQQSKTALEPY
WSNESLNTHIIIATNFADIIEHFYQTTIALKAA-SKARELNPPGTEIAPEGVFVTKKEAEEFELEELFNEQ-VLKIQSWN
PGYPVPGQIAIHSA*YTNIQSQSIERAKRLLWWHINCLIWGEHSVAEYITRLQTWLATPEKYRGKDAPTVEAITRPIRVA
PARTGASGPASGPVRYRRHNLQPRRRKV--KTTIEYGKSRPKSRDRPRSRVGSMLPHPAPSSSGPSSSSQLRS------
>ehbv-avi.12-anseriformes-con|polyprotein  
MDG--------SPACGG-RGKRVLVSALTN-CL-----RVWMAGDCHLPFLLAGSLYTHKILMCSLHLLLILLV----LY
MAFCHCFHYFSSSSSD*DLIQDIYLTTITLQKA-SARSQDLALAGTDVL----ISKEEAEDLELDEFFEEQ-VLKIQKWN
PGYPIPSQ?AVHLTVYSEIQMTTIDRAK*LLWWCINHLTWGESSIAKYIARLQTCLSNPEKNRGKDAPTTEAITRPIGVS
PHRSGASGPARSPFRSRRQCLAPRRQKV--KNTAEYGRPWSKSRDRQSSHVGSPVLHSEPSTSRSSPAGRQY-------
>ehbv-avi.15-gaviiformes|polyprotein 
MFWLRLHPSPHGAQIQGNFTKFLLLLLVTVPCIL-CALNDSLYMDPTVKRALSSVYDLPDDFFPDIKILL*QSKTALEPY
W*NESLNTYVITATNFADLIEDFYQTTIALKAASA*ARDLNPTGTEVAPEQVLITKEEAEDIELDNLFQEQ-VLRIQQWN
ASYPVPGQIAIHLVAYSGIQQRSIERAKRLLWWHINCLIWGEHSVAEYIARLQTWLSTPEKDQGKDAPTIEAITRPIRVA
PARSGASGVAGGPSRSRRNNLQSK---V--KTTVEYGSARSKSRERPPSRVGSPVLHTEPSSSTSSTSGRL*-------
>ehbv-avi.14-gaviiformes|polyprotein 
----------FGAQKQGNFKNFLLLLLVTVPCNT-CALNLTLCMDPTVKRALSSVYNLPDDFFPDIKILLQQSKTALEPY
WSNESLNTHVVIATNSADLIEDFYQTTIALKAASAKARELNPPGTEIAPEAVFGTKEEVEEFELEQLFEEQ-VLKIQTWN
PGYPVPGQIAIHLAGYANIQSQSIERAKRLLWWHINCLIWAEQSVADYIARLQTRLATPEKHRGKDAPTIEAITRPIRVA
PTCSGASGPARGPTRSRRNNLQPRRRKVRTKTTVEYGTSRSKSRDGARSRAGSPVPHTEPSSSRSSLSGRT*-------
>ehbv-avi.1-neoaves-con|polyprotein  
MEGISV?PLNSQACQQGIYYTLLLLLSCCLCLNE-TICIDSLHMEPTVRIALKNVHSLSEHFFPPVPELLTFAEDVLEPY
LQKDSENKHVVIATNFMD----FYEVIQALEKAAAAVRSLRSQL---------EIQIFLKIKEILINYLKP-LEKI*V-A
PTLPMENQIGIHLATYN*LT*TSIHRAHRLMWWHIQSLVGREDKIAE*MAKLRTGLATPSQYRGRDAPTIEAITSPVRVA
PQSPNQTHAAARRARSTRRRNPSIRRRVV-HTRTVYETPRSCVGSNEPHNGSSFSRTSKPHRTQSPPQNH---------
>ehbv-avi.20-cariama|polyprotein 
IQFLRLHSCPCAVYSQGIVMISLLLLYAVPCFYAHVLCNDSLLLDPLLKQALANIHDLRGDLFPEIYGFLKFAKRTLDLY
LEKESHNHYAITATNFADLIQDFLATITALGKAANAAKRLTPEGTPKPPP---EVDFGDDGAERDKLSETI-QGAIANWN
PSYPVTVQTGIHLAVYNFLQFQTLVKAQRLLWWQ-?CLIWGESNMADYITRLQTWLLTPAGYTVKDASTIEAITRPIQVA
PHSATNTSNAGGHPR----LRGRKKGTYI-QKKTVRTRSKT?SKRLCDLTRAPPSHVMRKVTQDTPSPRR*--------
>ehbv-avi.25-chaetura|polyprotein 
MQV*RLHPSPHRD*SQGIVTYLLLLLYA----------------------------------------------------
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----------VFLATCSTMQNKVLKCT*RLLWWHLNSLMWGEANIAEYVAHLKAWLLTPVAYQGKDAPTIEAITRPIRVA
PQSPGNTMHCGESRRNL*RLRGRKRELHV-QKRTVRTKSKPVWHREISHGVPSL*DKRSHSRLHSPWW*N*--------
>ehbv-avi.32-tinamiformes-con|polyprotein 
MQCLRLHSFHHRA*LQGIFMIMYLLLLIAVSCNKTYHCNDSLLIYSVIRQVLQNIHKLPLDFPPQIPGLLKFAEDALQSY
LQSESNNKHIIIINNFMDQLHNFYGAMTPLEKPATATENLSPGVARDTRQT-DEVDFLKD*QDLEFMFETI-NASINSWD
SNCPIGAQI-VHLDNYNIVLYNSLQYTRRILWWHLQSLTWVEIKATEYKAHFYTWQITLQRHYDREAQTFAAITQPIQVA
PHSIHLAQGAGMHARLRTRRRCEAT-------MVEMPRPLHLSSRQSTSHLIAATWFKKLECMPDQGLEDLKY------
>ehbv-avi.31-passeriformes|polyprotein   
MPGLGLLPPPYGAQ?QG?FYVLLLLLLYVVPCRPLDYFVNCLYTDPVVTETLASIDTLPDELFPEINEVVLHPKAVLQPY
DSDSRKNVHVLWAQQYLELIRDFLATTTAIGKLAVGARQFDSDNTPVP?---QV*TIA*LQENYDDLFDRL-LEGARSKI
LNI*IPAQINIVTATLHKEQRTSINRAAHLLWWHINAITWGESAVAEYVAKF*RWLLTLPAFRGCDAPTIEAITRSIRVA
PVSHKLSQGSRREGGCSRRSRPQCRTKV-----VQTQTKTTCRKKGKSKSKSKSPSHRTATPSRRRCPLLGNN------
>ehbv-avi.19-buceros|polyprotein 
ML----KVFSLLTGNQKLLIHMLSLSLTL--CIY----QTTVALDKVATAFI-----------------------ASRYG
GCQPAVSKHELIVKQYL--QKLFYG------------GDPIPTGTEGCSKRH-ISKEEAEEIELDDLFSNQ-QERILSWR
ADYPIIGQIQTHVSVDNWLQAKAIS*AKKLLWWHTNCLIWGKSNVTDYILRLRTWLSTPPNHRGRDATAIEAITRPI*VA
TQSHTAALRSGRIG*STHRLR-LCRREV---KTTVYGKSRSKSRGKLLKRAQSPLSHMLNTLQLDPPLLRDPD------
>ehbv-avi.29-psittacula|polyprotein 
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----------VVPGVLACKQLDSINRAG*LLWWHINALTWGESVVAEYIAKLKTWLLTLPEFCGKDAPTIEAITRSIRVA
PVSHELSQEPRKAPRQSRTGRPNYRQKV----VVHTSKTTYGKSKNKAKSPLQRSATPAPRRSPSPSQKK---------
>ehbv-avi.37-phylloscopus|polyprotein  
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---------------------------------------------------------------------SL-GEGVHNVS
RNIMIPGQIYAICAVIHKEQRSSLRHVAKLLWWHLHALTWG?STVAECLAKLKMWLLTPPTFRGHDAPAIEAITRSIRVA
PASHKLSQGPRRQNRSGVT-------------VGHEIRTRTHSQKAED*------------------------------
>ehbv-avi.24-apaloderma|polyprotein 
MQFLRLHPSPYRAWKQGIFMFCLPFVVYASHFSDCNISDSSLSMDPVVHRALTSVCDPLDDLFPDI?NFIKSSRSTLDPY
WESESMNTYIIRATHCINLIEGFYQIPRAIGKVAAA*RDLAPSGTEVAPGEVFVKKDEAKNINLESLSEEQ-QFRIRAWD
AGYPLVATTGVHLEAYHNIQQQLIE*AKRLL*WH---?IWGETSVSEYAVRL*TWRSMAARSGRKDAPTIEAITQPTRVA
PQRHQSSETSRGASRQGRSKGLGMHRRRV-KIVVEYERDKSRERPHSCARSPVPRTESPLARSSPGTG*R---------
>ehbv-avi.18-calypte|polyprotein 
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-----------------------------LLWWHI?SLLWG?SAVAEYVAKLHTWLITPEKY?C*DTPTIEAMTRNI*VA
PSSPELSPGPQR-------------------------------------------------------------------
>ehbv-avi.34-leptosomus|
VPFLRRHPSPSKAQVRGIFGIYLLLPSLALCIDACHRSDSLEFMDP*ARRALQHIHSLPRDFIPEIPKLIDFADGVLQHS
LQKEPQNKHVKIVTHFTDQLQNFYAVMKALEKAATASGRLASSE--RAPP---EMDFLEGSDDDKLIFDTI-QTNIVKVN
PAYPVAAQIGLHLAVYSTFLAKSLE?GKTTAVWHVQSLMCGESKVAEYTVHLRAWLMTPQAYRG*DAPTAAATPQPKRVA
LSGSNSDETEGHARSRHKTTGPNSRR-----------------------------------------------------
>ehbv-avi.54-apodiformes|polyprotein 
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----SHNLHVVITSNFADLIQDFLATTTASGKATTDVRNLAHEGTKEPPP---EADFREDGADVDK*FETV-QGAIREWN
PSYPTGEKTGIHLSIYNTLQ*QT*NKAQRLLW*HTNCLIWGESNVTEYIARLQK*LLTPATYRGKDAPTIKVIT--RPTQ
AAPHSSTNSLAVGENAGSR--GRKKT-----------------------------------------------------
>ehbv-avi.35-calypte| 
-----LHPSPCDGWMQGVVTNFLLLLYLAVPGRN-?LLQFFFG?DPTVE*ALSSVYDLPNNFVPDTTTSINQSKAAPE*H
WSGESLNTHVIIATHYTDLTEDFY*TTIALGKAS-?QWHITNPAGTNTVP----EIVLITQE*DEEIFLDEQVLNIQHWG
CDHPLAGQIGIHLAANHKMQQISVERAKRLFW*HSDCLFWEESSIAEYIAHLTTWLSTPKRCRGKDAPAIEAISKPIRVV
PSHSGPSR*AGGQSGNRRSMELQMCRWRV-KTSVEYGKPRSKSRDRRPQ*HVGSPVPHDEPSSPQSSPPW---------
>ehbv-avi.52-melopsittacus|polyprotein 
----------------------------------------LLYIDPVIAQSLSSIETLPDLFFPNLNDLLEHATTILQPY
DDHTRKNVHVIWAKIYLDLIKDFLATTNASHKLAVSAKQLDASQTPIPPS---LHEWYNLEEDYETLFDRILEGATSISG
GPLPIRAQIHIVAETIYLEQLRSIRSAQRILWWHVNALTWGETTVAEYVAKLKTWLLTPPDFRGRDAPTIEAITRSIRVA
PASHELSQGPRRSTNQGRRGRSSYRSKVV-TTHTKTRYG----------------------------------------
>ehbv-avi.49-psittaciformes|parrot-2-polyprotein 
---------------------------NAVPCDTIFCIVSCLYMDPVIITSLSSIEKLPDDFFPEISQLIEHAEIVLTPF
LNNDWQNIHVLWGDHYLDLIKGFLGPTTALSQLSIAARQLDGSQATPPAN---LSDYYNPQEDWKSLFAKI-QEAISTVD
VNFPISGRVAILSAELFKIQKDNIQKAKRLLWWHVNALTWVKSVVAEYIAKLQTWLLAPAAYRGKDAPTIEGIARSIRVA
PASGTGPSRPRREAHFPKEISKNLFW-----------------------------------------------------
>ehbv-avi.26-psittaciformes|polyprotein 
----------------------------AVPCDTEICIVSCLYMDPVTVESLSSIEKLLDDFFPEIEQLIDYAEVVLTLF
LNNDSRNIHVLR?DHYLDLIKGF*GTTIALNQMSTTARQLDASQTTPAKP----SDYYNPQEDWKSLLAKI-QKAISNVD
PNFPIPGRIAAVTYELHNIQEDNIQKAKELLWWHVNALPWGESVEAKYIAKLRTWLLALPACHGRDAPTSEAITRSIRVA
PASGAGPSRPRREAQKGGINKPSYRRKTA-RT-----------------------------------------------
>ehbv-avi.42-passeriformes-con|polyprotein 
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----SHNLHVVITSNFADLIQDFLATTTASGKATTDVRNLTPEGTTEPPP---EADFREDGADVDK*FETV-QGAIREWN
PSYPTGA*TGIHLSIYNTLQ*QT*NKAQRLLW*HTNCLIWGESNVTEYIARLQK*LLTPATYRGKDAPTIKVITRPTQGS
TTQLNKFF?AVGENAGSRGRKKT?-------------------------------------------------------
>ehbv-avi.43-gallirallus|Gallirallus_okinawae_86 
--------------TQGNFTFYLLLFLGTAPWR-LCVFDNALHMDPTVKRALLSVNDLPEDSIPVIKTLLNQSKRALEPS
WSTESLKTHVVIATSFADLIE?FYQTMVALKAASAHARNRNHSRKYF?-----ITKDESEDINLDNLFNEQ-VLKLQQWD
PNYPLSRQGAIHMFSNAQIQTHTI?KI*AMLWWHINCLRWGKSSVAEYIVRLQTW-------------------------
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>ehbv-avi.53-picoides|polyprotein 
---?LHL--------RLLVLYAVPCELLYDIY----CIDSQLYMDPVLAQTLGSVYNLPENFIPELKSAIKYTECMLDPW
NQRNSTNVHVIWPNNYLDILKGFLASPSALQKLALSAKQLNPQQTPLPPQ---LDNFIYPDNFDH-FLDEV-NGVIGTTE
PNFPVPARRAARAHVYFS--------------------------------------------------------------
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>ehbv-avi.48-podiceps| 
----LHPSPCGAQTQGNFTIYLLLLLVTVPCYT--CALNCTLCMDSTVKRALSSVYDLSDDFFPDTNAL--------EPY
W*NESLNMHVIIATNFAGLIEDFYQTTLALQSACAKARDLNPSGTETAPEEVFVTKEEAEQFDLDELFQEQ-VLKIHQWN
AAYPIPGQVAIHMASYVQIQMRSIERAKRLLWWHINCLIWGEHSVADYIALLQTWLSTPEKYRGKDAPTIEAITRPIRVV
PACTGASGPA*GLSRSR*HHTLQL*RRKV-KTTVEYGSSRSKSRDRPRSHVGSLIPHSEPSSGRSSISGR*--------