/
__init__.py
82 lines (75 loc) · 2.99 KB
/
__init__.py
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"""Load Glottolog lanuoid tree ``md.ini`` files into SQLite3 database."""
from ._globals import SESSION as Session # noqa: N811
from ._tools import sha256sum
from .backend import (print_versions,
set_engine,
connect,
scalar,
iterrows)
from .backend.export import (print_dataset,
print_schema,
print_query_sql,
backup,
dump_sql,
csv_zipfile,
print_rows,
write_csv,
hash_csv)
from .backend.load import main as load
from .backend.models import Dataset, Producer, Config
from .backend.pandas import pd_read_sql, pd_read_json_lines
from .backend.sqlite_master import print_table_sql, select_tables_nrows
from .backend.views import TABLES as views # noqa: N811
from .languoids import set_root, iterfiles
from .checks import check, compare_languoids
from .export import (print_languoid_stats,
iterlanguoids,
checksum,
write_json_lines as write_languoids,
pd_read_languoids,
write_files)
from .glottolog import glottolog_version, checkout_or_clone
from .logging_ import configure_logging
from .models import LEVEL, Languoid
from .queries import (get_example_query,
get_json_query as get_languoids_query,
iterdescendants)
from .settings import configure, get_default_root
__all__ = ['Session',
'sha256sum',
'print_versions',
'set_engine', 'connect', 'scalar', 'iterrows',
'print_dataset',
'print_schema', 'print_query_sql',
'backup', 'dump_sql', 'csv_zipfile',
'print_rows', 'write_csv', 'hash_csv',
'load',
'Dataset', 'Producer', 'Config',
'pd_read_sql', 'pd_read_json_lines',
'print_table_sql', 'select_tables_nrows',
'views',
'set_root', 'iterfiles',
'check', 'compare_languoids',
'print_languoid_stats',
'iterlanguoids',
'checksum',
'write_languoids',
'pd_read_languoids',
'write_files',
'glottolog_version', 'checkout_or_clone',
'configure_logging',
'LEVEL', 'Languoid',
'get_example_query',
'get_languoids_query',
'iterdescendants',
'configure',
'engine', 'root']
__title__ = 'treedb'
__version__ = '2.6.1'
__author__ = 'Sebastian Bank <sebastian.bank@uni-leipzig.de>'
__license__ = 'MIT, see LICENSE.txt'
__copyright__ = 'Copyright (c) 2017-2023 Sebastian Bank'
# default engine: in-memory database
engine = set_engine(None)
# default root: GLOTTOLOG_REPO_ROOT, or treedb.ini glottolog:repo_root, or ./glottolog
root = set_root(get_default_root(env_var='GLOTTOLOG_REPO_ROOT'))