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1.0.2 test_hdf5 falure on s390 Fedora Rawhide #1488

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opoplawski opened this issue Jan 22, 2023 · 10 comments
Open

1.0.2 test_hdf5 falure on s390 Fedora Rawhide #1488

opoplawski opened this issue Jan 22, 2023 · 10 comments
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@ogressel
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hdf5 needs more information! Further information is requested

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@opoplawski
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        Start 101: test_hdf5.pro
101: Test command: /builddir/build/BUILD/gdl-1.0.2/build/src/gdl "-quiet" "-e" "if execute('test_hdf5') ne 1 then exit, status=1"
101: Working Directory: /builddir/build/BUILD/gdl-1.0.2/build/testsuite
101: Environment variables: 
101:  LC_COLLATE=C
101:  GDL_PATH=/builddir/build/BUILD/gdl-1.0.2/testsuite/:/builddir/build/BUILD/gdl-1.0.2/src/pro/
101:  GDL_STARTUP=
101:  IDL_STARTUP=
101: Test timeout computed to be: 3600
101: % Compiled module: TEST_HDF5.
101: % Compiled module: FILE_SEARCH_FOR_TESTSUITE.
101: % Compiled module: BANNER_FOR_TESTSUITE.
101: % Compiled module: GDL_IDL_FL.
101: % TEST_HDF5_BYTE_ARRAY: 
101:   NO errors encountered during TEST_HDF5_BYTE_ARRAY tests  
101: % TEST_HDF5_STRING:   NO errors encountered during TEST_HDF5_STRING tests  
101: h5dump error: unable to open attribute "attr-02"
101: % TEST_HDF5_ATTR:   12 errors encountered during TEST_HDF5_ATTR tests  
101: % TEST_HDF5_DATA:   32 errors encountered during TEST_HDF5_DATA tests  
101: % H5G_CREATE: Bad value
101: % TEST_HDF5_OBJ_INFO:   NO errors encountered during TEST_HDF5_OBJ_INFO tests  
101: % TEST_HDF5_COMP:   12.0000 errors encountered during TEST_HDF5_COMP tests  
101: % H5G_CREATE: Bad value
101: % TEST_HDF5: =======================================================
101: % TEST_HDF5: =                                                     =
101: % TEST_HDF5: =  56.0000 errors encountered during TEST_HDF5 tests  =
101: % TEST_HDF5: =                                                     =
101: % TEST_HDF5: =======================================================
101/196 Test #101: test_hdf5.pro ......................***Failed    0.48 sec
@slayoo
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slayoo commented Jan 22, 2023

CC: @ogressel
Oliver, please could you have a look at the above logs provided by Orion who packages GDL for Fedora?
Thanks!

@alaingdl
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a part of the problem (exactly 5.00 ;) errors) comes from the fact the test requests two external executables (h5diff and h5dump). We have to found a solution but those tests are very convenient ..

@opoplawski
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I don't think that is it. The HDF5 utilities including h5diff and h5dump are installed when building gdl. The test succeeds on other arches.

@ogressel
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It would be useful to have debug=True set by hand in the various routines in file hdf5_fun.cpp.

P.S.: I'll cast the error count to integer when I get a chance ;)

@ogressel
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Could be a big endian vs. little endian issue. Did the test succeed in earlier versions of GDL?

@opoplawski
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Here is the output from the previous build of 1.0.1:

        Start 101: test_hdf5.pro
101: Test command: /builddir/build/BUILD/gdl-1.0.1/build/src/gdl "-quiet" "-e" "test_hdf5"
101: Working Directory: /builddir/build/BUILD/gdl-1.0.1/build/testsuite
101: Environment variables: 
101:  LC_COLLATE=C
101:  GDL_PATH=/builddir/build/BUILD/gdl-1.0.1/testsuite/:/builddir/build/BUILD/gdl-1.0.1/src/pro/
101:  GDL_STARTUP=
101:  IDL_STARTUP=
101: Test timeout computed to be: 3600
101: % Compiled module: TEST_HDF5.
101: % Compiled module: FILE_SEARCH_FOR_TESTSUITE.
101: % TEST_HDF5_BYTE_ARRAY: Bad TYPE ...
101: % Compiled module: BANNER_FOR_TESTSUITE.
101: % Compiled module: GDL_IDL_FL.
101: % TEST_HDF5_BYTE_ARRAY: 
101:   1 errors encountered during TEST_HDF5_BYTE_ARRAY tests  
101: % TEST_HDF5_STRING:   NO errors encountered during TEST_HDF5_STRING tests  
101: % H5F_OPEN: Unable to open file
101: % Execution halted at: TEST_HDF5_ATTR     168 /builddir/build/BUILD/gdl-1.0.1/testsuite/test_hdf5.pro
101: %                      TEST_HDF5          316 /builddir/build/BUILD/gdl-1.0.1/testsuite/test_hdf5.pro
101: %                      $MAIN$          
101/190 Test #101: test_hdf5.pro ......................   Passed    0.17 sec

@opoplawski
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With debug:

    Start 103: test_hdf5.pro
103: Test command: /builddir/build/BUILD/gdl-1.0.2/build/src/gdl "-quiet" "-e" "if execute('test_hdf5') ne 1 then exit, status=1"
103: Working Directory: /builddir/build/BUILD/gdl-1.0.2/build/testsuite
103: Environment variables: 
103:  LC_COLLATE=C
103:  GDL_PATH=/builddir/build/BUILD/gdl-1.0.2/testsuite/:/builddir/build/BUILD/gdl-1.0.2/src/pro/
103:  GDL_STARTUP=
103:  IDL_STARTUP=
103: Test timeout computed to be: 3600
103: % Compiled module: TEST_HDF5.
103: % Compiled module: FILE_SEARCH_FOR_TESTSUITE.
103: data rank is: 1
103: dimensions are: 3,
103: match 'GDL_BYTE'
103: ourType : 1
103: % Compiled module: BANNER_FOR_TESTSUITE.
103: % Compiled module: GDL_IDL_FL.
103: % TEST_HDF5_BYTE_ARRAY: 
103:   NO errors encountered during TEST_HDF5_BYTE_ARRAY tests  
103: data rank is: 1
103: dimensions are: 1,
103: ourType : 7
103: fixed-length string dataset
103: % TEST_HDF5_STRING:   NO errors encountered during TEST_HDF5_STRING tests  
103: h5dump error: unable to open attribute "attr-02"
103: dataspace rank=1
103:  curr_dims=[4];
103: dataspace rank=2
103:  curr_dims=[3,4];
103: dataspace rank=3
103:  curr_dims=[2,3,4];
103: dataspace rank=1
103:  curr_dims=[4];
103: dataspace rank=2
103:  curr_dims=[3,4];
103: dataspace rank=3
103:  curr_dims=[2,3,4];
103: dataspace rank=1
103:  curr_dims=[4];
103: dataspace rank=2
103:  curr_dims=[3,4];
103: dataspace rank=3
103:  curr_dims=[2,3,4];
103: data rank is: 0
103: match 'GDL_INT'
103: ourType : 2
103: data rank is: 1
103: dimensions are: 4,
103: match 'GDL_LONG'
103: ourType : 3
103: data rank is: 2
103: dimensions are: 3,4,
103: match 'GDL_LONG64'
103: ourType : 14
103: data rank is: 3
103: dimensions are: 2,3,4,
103: ourType : 7
103: fixed-length string dataset
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 0
103: match 'GDL_LONG'
103: ourType : 3
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 1
103: dimensions are: 4,
103: match 'GDL_LONG64'
103: ourType : 14
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 2
103: dimensions are: 3,4,
103: ourType : 7
103: fixed-length string dataset
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 3
103: dimensions are: 2,3,4,
103: match 'GDL_INT'
103: ourType : 2
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 0
103: match 'GDL_LONG64'
103: ourType : 14
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 1
103: dimensions are: 4,
103: ourType : 7
103: fixed-length string dataset
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 2
103: dimensions are: 3,4,
103: match 'GDL_INT'
103: ourType : 2
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 3
103: dimensions are: 2,3,4,
103: match 'GDL_LONG'
103: ourType : 3
103: % TEST_HDF5_ATTR:   12 errors encountered during TEST_HDF5_ATTR tests  
103: dataspace rank=1
103:  curr_dims=[4];
103: dataspace rank=2
103:  curr_dims=[4,5];
103: dataspace rank=3
103:  curr_dims=[4,5,6];
103: dataspace rank=1
103:  curr_dims=[4];
103: dataspace rank=2
103:  curr_dims=[4,5];
103: dataspace rank=3
103:  curr_dims=[4,5,6];
103: dataspace rank=1
103:  curr_dims=[4];
103: dataspace rank=2
103:  curr_dims=[4,5];
103: dataspace rank=3
103:  curr_dims=[4,5,6];
103: data rank is: 0
103: match 'GDL_INT'
103: ourType : 2
103: data rank is: 1
103: dimensions are: 4,
103: match 'GDL_LONG'
103: ourType : 3
103: data rank is: 2
103: dimensions are: 4,5,
103: match 'GDL_LONG64'
103: ourType : 14
103: data rank is: 3
103: dimensions are: 4,5,6,
103: ourType : 7
103: fixed-length string dataset
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 0
103: match 'GDL_LONG'
103: ourType : 3
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 1
103: dimensions are: 4,
103: match 'GDL_LONG64'
103: ourType : 14
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 2
103: dimensions are: 4,5,
103: ourType : 7
103: fixed-length string dataset
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 3
103: dimensions are: 4,5,6,
103: match 'GDL_INT'
103: ourType : 2
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 0
103: match 'GDL_LONG64'
103: ourType : 14
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 1
103: dimensions are: 4,
103: ourType : 7
103: fixed-length string dataset
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 2
103: dimensions are: 4,5,
103: match 'GDL_INT'
103: ourType : 2
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 3
103: dimensions are: 4,5,6,
103: match 'GDL_LONG'
103: ourType : 3
103: data rank is: 0
103: match 'GDL_INT'
103: ourType : 2
103: dataspace rank=1
103:  curr_dims=[4];
103: data rank is: 1
103: dimensions are: 4,
103: match 'GDL_LONG'
103: ourType : 3
103: dataspace rank=2
103:  curr_dims=[4,5];
103: data rank is: 2
103: dimensions are: 4,5,
103: match 'GDL_LONG64'
103: ourType : 14
103: dataspace rank=3
103:  curr_dims=[4,5,6];
103: data rank is: 3
103: dimensions are: 4,5,6,
103: ourType : 7
103: fixed-length string dataset
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 0
103: match 'GDL_LONG'
103: ourType : 3
103: dataspace rank=1
103:  curr_dims=[4];
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 1
103: dimensions are: 4,
103: match 'GDL_LONG64'
103: ourType : 14
103: dataspace rank=2
103:  curr_dims=[4,5];
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 2
103: dimensions are: 4,5,
103: ourType : 7
103: fixed-length string dataset
103: dataspace rank=3
103:  curr_dims=[4,5,6];
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 3
103: dimensions are: 4,5,6,
103: match 'GDL_INT'
103: ourType : 2
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 0
103: match 'GDL_LONG64'
103: ourType : 14
103: dataspace rank=1
103:  curr_dims=[4];
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 1
103: dimensions are: 4,
103: ourType : 7
103: fixed-length string dataset
103: dataspace rank=2
103:  curr_dims=[4,5];
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 2
103: dimensions are: 4,5,
103: match 'GDL_INT'
103: ourType : 2
103: dataspace rank=3
103:  curr_dims=[4,5,6];
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 3
103: dimensions are: 4,5,6,
103: match 'GDL_LONG'
103: ourType : 3
103: dataspace rank=1; start=[1]; count=[2]; block=[1]; stride=[1];
103: dataspace rank=1
103:  curr_dims=[2];
103: data rank is: 1
103: dimensions are: 2,
103: match 'GDL_LONG'
103: ourType : 3
103: dataspace rank=2; start=[1,1]; count=[2,3]; block=[1,1]; stride=[1,1];
103: dataspace rank=2
103:  curr_dims=[2,3];
103: data rank is: 2
103: dimensions are: 2,3,
103: match 'GDL_LONG64'
103: ourType : 14
103: dataspace rank=3; start=[1,1,1]; count=[2,3,4]; block=[1,1,1]; stride=[1,1,1];
103: dataspace rank=3
103:  curr_dims=[2,3,4];
103: data rank is: 3
103: dimensions are: 2,3,4,
103: ourType : 7
103: fixed-length string dataset
103: dataspace rank=1; start=[1]; count=[2]; block=[1]; stride=[1];
103: dataspace rank=1
103:  curr_dims=[2];
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 1
103: dimensions are: 2,
103: match 'GDL_LONG64'
103: ourType : 14
103: dataspace rank=2; start=[1,1]; count=[2,3]; block=[1,1]; stride=[1,1];
103: dataspace rank=2
103:  curr_dims=[2,3];
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 2
103: dimensions are: 2,3,
103: ourType : 7
103: fixed-length string dataset
103: dataspace rank=3; start=[1,1,1]; count=[2,3,4]; block=[1,1,1]; stride=[1,1,1];
103: dataspace rank=3
103:  curr_dims=[2,3,4];
103: array datatype of rank: 1
103: dimensions are: 3,
103: data rank is: 3
103: dimensions are: 2,3,4,
103: match 'GDL_INT'
103: ourType : 2
103: dataspace rank=1; start=[1]; count=[2]; block=[1]; stride=[1];
103: dataspace rank=1
103:  curr_dims=[2];
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 1
103: dimensions are: 2,
103: ourType : 7
103: fixed-length string dataset
103: dataspace rank=2; start=[1,1]; count=[2,3]; block=[1,1]; stride=[1,1];
103: dataspace rank=2
103:  curr_dims=[2,3];
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 2
103: dimensions are: 2,3,
103: match 'GDL_INT'
103: ourType : 2
103: dataspace rank=3; start=[1,1,1]; count=[2,3,4]; block=[1,1,1]; stride=[1,1,1];
103: dataspace rank=3
103:  curr_dims=[2,3,4];
103: array datatype of rank: 2
103: dimensions are: 3,2,
103: data rank is: 3
103: dimensions are: 2,3,4,
103: match 'GDL_LONG'
103: ourType : 3
103: % TEST_HDF5_DATA:   32 errors encountered during TEST_HDF5_DATA tests  
103: % H5G_CREATE: Bad value
103: % TEST_HDF5_OBJ_INFO:   NO errors encountered during TEST_HDF5_OBJ_INFO tests  
103:   creating type for struct '$truct' of size 147 with 5 members
103:   tag 'A_BYTE' of rank 0, dimensions are: (), size=1, offs=0
103:   tag 'A_BYTE_ARR' of rank 1, dimensions are: (4), size=4, offs=1
103:   tag 'SUB' of rank 0, dimensions are: (), size=120, offs=5
103:     creating type for struct '$truct' of size 93 with 7 members
103:     tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:     tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:     tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:     tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:     tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:     tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:     tag 'A_STRING' of rank 0, dimensions are: (), size=15, offs=78
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=13, offs=125
103:   tag 'A_STRING_ARR' of rank 1, dimensions are: (3), size=9, offs=139
103:   gathering data for struct '$truct' of size 151 with 5 members
103:   tag 'A_BYTE' of rank 0, dimensions are: (), size=1, offs=0
103:   tag 'A_BYTE_ARR' of rank 1, dimensions are: (4), size=4, offs=1
103:   tag 'SUB' of rank 1, dimensions are: (1), size=120, offs=5
103:     gathering data for struct '$truct' of size 94 with 7 members
103:     tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:     tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:     tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:     tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:     tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:     tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:     tag 'A_STRING' of rank 0, dimensions are: (), size=16, offs=78
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=14, offs=125
103:   tag 'A_STRING_ARR' of rank 1, dimensions are: (3), size=12, offs=139
103:   gathering data for struct '$truct' of size 151 with 5 members
103:   tag 'A_BYTE' of rank 0, dimensions are: (), size=1, offs=0
103:   tag 'A_BYTE_ARR' of rank 1, dimensions are: (4), size=4, offs=1
103:   tag 'SUB' of rank 1, dimensions are: (1), size=120, offs=5
103:     gathering data for struct '$truct' of size 94 with 7 members
103:     tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:     tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:     tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:     tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:     tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:     tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:     tag 'A_STRING' of rank 0, dimensions are: (), size=16, offs=78
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=14, offs=125
103:   tag 'A_STRING_ARR' of rank 1, dimensions are: (3), size=12, offs=139
103: dataspace rank=2
103:  curr_dims=[2,3];
103:   creating type for struct '$truct' of size 93 with 7 members
103:   tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:   tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:   tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:   tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:   tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:   tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=15, offs=78
103:   gathering data for struct '$truct' of size 94 with 7 members
103:   tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:   tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:   tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:   tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:   tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:   tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=16, offs=78
103:   gathering data for struct '$truct' of size 94 with 7 members
103:   tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:   tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:   tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:   tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:   tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:   tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=16, offs=78
103:   gathering data for struct '$truct' of size 94 with 7 members
103:   tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:   tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:   tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:   tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:   tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:   tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=16, offs=78
103:   gathering data for struct '$truct' of size 94 with 7 members
103:   tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:   tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:   tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:   tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:   tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:   tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=16, offs=78
103:   gathering data for struct '$truct' of size 94 with 7 members
103:   tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:   tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:   tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:   tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:   tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:   tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=16, offs=78
103:   gathering data for struct '$truct' of size 94 with 7 members
103:   tag 'AN_INTEGER' of rank 0, dimensions are: (), size=2, offs=0
103:   tag 'A_LONG' of rank 0, dimensions are: (), size=4, offs=2
103:   tag 'A_FLOAT' of rank 0, dimensions are: (), size=4, offs=6
103:   tag 'A_DOUBLE' of rank 0, dimensions are: (), size=8, offs=10
103:   tag 'A_FLOAT_ARR' of rank 1, dimensions are: (3), size=12, offs=18
103:   tag 'A_DOUBLE_ARR' of rank 2, dimensions are: (2,3), size=48, offs=30
103:   tag 'A_STRING' of rank 0, dimensions are: (), size=16, offs=78
103: data rank is: 0
103: ourType : 8
103: compound dataset
103:   compound datatype of size 125 with 5 members
103:   found integer element 'A_BYTE' of size 1 at offset 0
103: match 'GDL_BYTE'
103:   found array element 'A_BYTE_ARR' of size 4 at offset 1
103: match 'GDL_BYTE'
103:     compound datatype of size 94 with 7 members
103:     found integer element 'AN_INTEGER' of size 2 at offset 0
103: match 'GDL_INT'
103:     found integer element 'A_LONG' of size 4 at offset 2
103: match 'GDL_LONG'
103:     found float element 'A_FLOAT' of size 4 at offset 6
103: match 'GDL_LONG'
103:     found float element 'A_DOUBLE' of size 8 at offset 10
103: match 'GDL_LONG64'
103:     found array element 'A_FLOAT_ARR' of size 12 at offset 18
103: match 'GDL_LONG'
103:     found array element 'A_DOUBLE_ARR' of size 48 at offset 30
103: match 'GDL_LONG64'
103:     found string element 'A_STRING' of size 16 at offset 78
103:   found nested compound element 'SUB' of size 94 at offset 5
103:   found string element 'A_STRING' of size 14 at offset 99
103:   found array element 'A_STRING_ARR' of size 12 at offset 113
103: data rank is: 0
103: ourType : 8
103: compound dataset
103:   compound datatype of size 125 with 5 members
103:   found integer element 'A_BYTE' of size 1 at offset 0
103: match 'GDL_BYTE'
103:   found array element 'A_BYTE_ARR' of size 4 at offset 1
103: match 'GDL_BYTE'
103:     compound datatype of size 94 with 7 members
103:     found integer element 'AN_INTEGER' of size 2 at offset 0
103: match 'GDL_INT'
103:     found integer element 'A_LONG' of size 4 at offset 2
103: match 'GDL_LONG'
103:     found float element 'A_FLOAT' of size 4 at offset 6
103: match 'GDL_LONG'
103:     found float element 'A_DOUBLE' of size 8 at offset 10
103: match 'GDL_LONG64'
103:     found array element 'A_FLOAT_ARR' of size 12 at offset 18
103: match 'GDL_LONG'
103:     found array element 'A_DOUBLE_ARR' of size 48 at offset 30
103: match 'GDL_LONG64'
103:     found string element 'A_STRING' of size 16 at offset 78
103:   found nested compound element 'SUB' of size 94 at offset 5
103:   found string element 'A_STRING' of size 14 at offset 99
103:   found array element 'A_STRING_ARR' of size 12 at offset 113
103: % TEST_HDF5_COMP:   12.0000 errors encountered during TEST_HDF5_COMP tests  
103: % H5G_CREATE: Bad value
103: % TEST_HDF5: =======================================================
103: % TEST_HDF5: =                                                     =
103: % TEST_HDF5: =  56.0000 errors encountered during TEST_HDF5 tests  =
103: % TEST_HDF5: =                                                     =
103: % TEST_HDF5: =======================================================
3/3 Test #103: test_hdf5.pro ....................***Failed    0.32 sec

@ogressel
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Thanks @opoplawski . Cannot spot anything suspicious. Could you revert to debug=False again and then uncomment the ;;; help, ... bits in testsuite/test_hdf5.pro?

@opoplawski
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Sorry, meant to get this to you earlier:

    Start 103: test_hdf5.pro
103: Test command: /builddir/build/BUILD/gdl-1.0.2/build/src/gdl "-quiet" "-e" "if execute('test_hdf5') ne 1 then exit, status=1"
103: Working Directory: /builddir/build/BUILD/gdl-1.0.2/build/testsuite
103: Environment variables: 
103:  LC_COLLATE=C
103:  GDL_PATH=/builddir/build/BUILD/gdl-1.0.2/testsuite/:/builddir/build/BUILD/gdl-1.0.2/src/pro/
103:  GDL_STARTUP=
103:  IDL_STARTUP=
103: Test timeout computed to be: 3600
103: % Compiled module: TEST_HDF5.
103: % Compiled module: FILE_SEARCH_FOR_TESTSUITE.
103: % Compiled module: BANNER_FOR_TESTSUITE.
103: % Compiled module: GDL_IDL_FL.
103: % TEST_HDF5_BYTE_ARRAY: 
103:   NO errors encountered during TEST_HDF5_BYTE_ARRAY tests  
103: % TEST_HDF5_STRING:   NO errors encountered during TEST_HDF5_STRING tests  
103: h5dump error: unable to open attribute "attr-02"
103: <Expression>    INT       =      123
103: READ_ATTR_DATA  INT       =      123
103: <Expression>    FLOAT     = Array[4]
103: READ_ATTR_DATA  LONG      = Array[4]
103: <Expression>    DOUBLE    = Array[4, 3]
103: READ_ATTR_DATA  LONG64    = Array[4, 3]
103: <Expression>    STRING    = Array[4, 3, 2]
103: READ_ATTR_DATA  STRING    = Array[4, 3, 2]
103: <Expression>    FLOAT     = Array[3]
103: READ_ATTR_DATA  LONG      = Array[3]
103: <Expression>    DOUBLE    = Array[3, 4]
103: READ_ATTR_DATA  LONG64    = Array[3, 4]
103: <Expression>    STRING    = Array[3, 4, 3]
103: READ_ATTR_DATA  STRING    = Array[3, 4, 3]
103: <Expression>    INT       = Array[3, 4, 3, 2]
103: READ_ATTR_DATA  INT       = Array[3, 4, 3, 2]
103: <Expression>    DOUBLE    = Array[2, 3]
103: READ_ATTR_DATA  LONG64    = Array[2, 3]
103: <Expression>    STRING    = Array[2, 3, 4]
103: READ_ATTR_DATA  STRING    = Array[2, 3, 4]
103: <Expression>    INT       = Array[2, 3, 4, 3]
103: READ_ATTR_DATA  INT       = Array[2, 3, 4, 3]
103: <Expression>    FLOAT     = Array[2, 3, 4, 3, 2]
103: READ_ATTR_DATA  LONG      = Array[2, 3, 4, 3, 2]
103: % TEST_HDF5_ATTR:   12 errors encountered during TEST_HDF5_ATTR tests  
103: <Expression>    INT       =      123
103: READ_MOCK_DATA  INT       =      123
103: <Expression>    FLOAT     = Array[4]
103: READ_MOCK_DATA  LONG      = Array[4]
103: <Expression>    DOUBLE    = Array[5, 4]
103: READ_MOCK_DATA  LONG64    = Array[5, 4]
103: <Expression>    STRING    = Array[6, 5, 4]
103: READ_MOCK_DATA  STRING    = Array[6, 5, 4]
103: <Expression>    FLOAT     = Array[3]
103: READ_MOCK_DATA  LONG      = Array[3]
103: <Expression>    DOUBLE    = Array[3, 4]
103: READ_MOCK_DATA  LONG64    = Array[3, 4]
103: <Expression>    STRING    = Array[3, 5, 4]
103: READ_MOCK_DATA  STRING    = Array[3, 5, 4]
103: <Expression>    INT       = Array[3, 6, 5, 4]
103: READ_MOCK_DATA  INT       = Array[3, 6, 5, 4]
103: <Expression>    DOUBLE    = Array[2, 3]
103: READ_MOCK_DATA  LONG64    = Array[2, 3]
103: <Expression>    STRING    = Array[2, 3, 4]
103: READ_MOCK_DATA  STRING    = Array[2, 3, 4]
103: <Expression>    INT       = Array[2, 3, 5, 4]
103: READ_MOCK_DATA  INT       = Array[2, 3, 5, 4]
103: <Expression>    FLOAT     = Array[2, 3, 6, 5, 4]
103: READ_MOCK_DATA  LONG      = Array[2, 3, 6, 5, 4]
103: <Expression>    INT       =      123
103: READ_MOCK_DATA  INT       =      123
103: <Expression>    FLOAT     = Array[4]
103: READ_MOCK_DATA  LONG      = Array[4]
103: <Expression>    DOUBLE    = Array[5, 4]
103: READ_MOCK_DATA  LONG64    = Array[5, 4]
103: <Expression>    STRING    = Array[6, 5, 4]
103: READ_MOCK_DATA  STRING    = Array[6, 5, 4]
103: <Expression>    FLOAT     = Array[3]
103: READ_MOCK_DATA  LONG      = Array[3]
103: <Expression>    DOUBLE    = Array[3, 4]
103: READ_MOCK_DATA  LONG64    = Array[3, 4]
103: <Expression>    STRING    = Array[3, 5, 4]
103: READ_MOCK_DATA  STRING    = Array[3, 5, 4]
103: <Expression>    INT       = Array[3, 6, 5, 4]
103: READ_MOCK_DATA  INT       = Array[3, 6, 5, 4]
103: <Expression>    DOUBLE    = Array[2, 3]
103: READ_MOCK_DATA  LONG64    = Array[2, 3]
103: <Expression>    STRING    = Array[2, 3, 4]
103: READ_MOCK_DATA  STRING    = Array[2, 3, 4]
103: <Expression>    INT       = Array[2, 3, 5, 4]
103: READ_MOCK_DATA  INT       = Array[2, 3, 5, 4]
103: <Expression>    FLOAT     = Array[2, 3, 6, 5, 4]
103: READ_MOCK_DATA  LONG      = Array[2, 3, 6, 5, 4]
103: SLAB            FLOAT     = Array[2]
103: READ_MOCK_DATA  LONG      = Array[2]
103: SLAB            DOUBLE    = Array[3, 2]
103: READ_MOCK_DATA  LONG64    = Array[3, 2]
103: SLAB            STRING    = Array[4, 3, 2]
103: READ_MOCK_DATA  STRING    = Array[4, 3, 2]
103: SLAB            DOUBLE    = Array[3, 2]
103: READ_MOCK_DATA  LONG64    = Array[3, 2]
103: SLAB            STRING    = Array[3, 3, 2]
103: READ_MOCK_DATA  STRING    = Array[3, 3, 2]
103: SLAB            INT       = Array[3, 4, 3, 2]
103: READ_MOCK_DATA  INT       = Array[3, 4, 3, 2]
103: SLAB            STRING    = Array[2, 3, 2]
103: READ_MOCK_DATA  STRING    = Array[2, 3, 2]
103: SLAB            INT       = Array[2, 3, 3, 2]
103: READ_MOCK_DATA  INT       = Array[2, 3, 3, 2]
103: SLAB            FLOAT     = Array[2, 3, 4, 3, 2]
103: READ_MOCK_DATA  LONG      = Array[2, 3, 4, 3, 2]
103: % TEST_HDF5_DATA:   32 errors encountered during TEST_HDF5_DATA tests  
103: % H5G_CREATE: Bad value
103: % TEST_HDF5_OBJ_INFO:   NO errors encountered during TEST_HDF5_OBJ_INFO tests  
103: ** Structure <Anonymous>, 5 tags,memsize =256, data length=120/147:
103:    A_BYTE          BYTE         4
103:    A_BYTE_ARR      BYTE      Array[4]
103:    SUB             STRUCT    -> <Anonymous> Array[1]
103:    A_STRING        STRING    'main compound'
103:    A_STRING_ARR    STRING    Array[3]
103: ** Structure <Anonymous>, 7 tags,memsize =120, data length=93/93:
103:    AN_INTEGER      INT            256
103:    A_LONG          LONG          33554432
103:    A_FLOAT         LONG        -842232769
103:    A_DOUBLE        LONG64       3689348814741959487
103:    A_FLOAT_ARR     LONG      Array[3]
103:    A_DOUBLE_ARR    LONG64    Array[2, 3]
103:    A_STRING        STRING    'nested compound'
103: ** Structure <Anonymous>, 5 tags,memsize =256, data length=120/147:
103:    A_BYTE          BYTE         4
103:    A_BYTE_ARR      BYTE      Array[4]
103:    SUB             STRUCT    -> <Anonymous> Array[1]
103:    A_STRING        STRING    'main compound'
103:    A_STRING_ARR    STRING    Array[3]
103: ** Structure <Anonymous>, 7 tags,memsize =120, data length=93/93:
103:    AN_INTEGER      INT              1
103:    A_LONG          LONG                 2
103:    A_FLOAT         FLOAT           1.10000
103:    A_DOUBLE        DOUBLE           1.2000000
103:    A_FLOAT_ARR     FLOAT     Array[3]
103:    A_DOUBLE_ARR    DOUBLE    Array[2, 3]
103:    A_STRING        STRING    'nested compound'
103: % TEST_HDF5_COMP:   12.0000 errors encountered during TEST_HDF5_COMP tests  
103: % H5G_CREATE: Bad value
103: % TEST_HDF5: =======================================================
103: % TEST_HDF5: =                                                     =
103: % TEST_HDF5: =  56.0000 errors encountered during TEST_HDF5 tests  =
103: % TEST_HDF5: =                                                     =
103: % TEST_HDF5: =======================================================
3/3 Test #103: test_hdf5.pro ....................***Failed    0.41 sec

@ogressel
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Thanks, @opoplawski . It appears there is an issue with the recognition of the datatype. I was wondering whether you could point me to a Hercules-image for Fedora Rawhide that I could use to build GDL on an s390 emulator.

@GillesDuvert GillesDuvert added the needs more information! Further information is requested label Mar 6, 2023
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