Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

parallel targetp fails on HPC #19

Closed
gogleva opened this issue Oct 30, 2017 · 2 comments
Closed

parallel targetp fails on HPC #19

gogleva opened this issue Oct 30, 2017 · 2 comments

Comments

@gogleva
Copy link
Owner

gogleva commented Oct 30, 2017

Error in checkForRemoteErrors(val) :
2 nodes produced errors; first error: subscript contains invalid names

@gogleva
Copy link
Owner Author

gogleva commented Oct 30, 2017

probably fails due to 'truncate_truncate' added to some seq ids by signalp ==> error is probably in truncate_seq helper function.
to do:

  • isolate the error
  • add unit test

@gogleva
Copy link
Owner Author

gogleva commented Oct 31, 2017

fixed, reason: cyclic truncation on the signalp stage

@gogleva gogleva closed this as completed Oct 31, 2017
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant