Docker or Singularity

[AMMMachado]

Hi,

First of all thank you for this amazing program.
I'm working in a cluster with the centos7. I tried to install the software several times, always with errors in the pip/Python distributions. Could you make available some docker and/or singularity for the deep consensus?
Best Regards
Andre

[MariaNattestad]

Hi Andre,

Yes, we are currently working on a version of DeepConsensus which will be easier to install with pip, and this new version will also include a docker image that should work with singularity as well.

Maria

[gevro]

Great to hear! Is there an estimate for when this might be available?

[AMMMachado]

Thank you @MariaNattestad . Currently, we are performing several genome assemblies, and we intend to include deepconsensus in our PcabioHifi pipeline. Do you have some time estimation for the next stable release?

André

[MariaNattestad]

We're hoping to have a release ready by the end of January, assuming all goes well :)

[MariaNattestad]

The release is now available! https://github.com/google/deepconsensus/releases/tag/v0.2.0