-
Notifications
You must be signed in to change notification settings - Fork 27
/
operations.hpp
889 lines (786 loc) · 30.2 KB
/
operations.hpp
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
#ifndef GRAPHBLAS_OPERATIONS_HPP_
#define GRAPHBLAS_OPERATIONS_HPP_
#include <vector>
#define __GRB_BACKEND_OPERATIONS_HEADER <graphblas/backend/__GRB_BACKEND_ROOT/operations.hpp>
#include __GRB_BACKEND_OPERATIONS_HEADER
#undef __GRB_BACKEND_OPERATIONS_HEADER
namespace graphblas {
// TODO(@ctcyang): make all operations mxm, mxv, etc. follow vxm() and assign()
// constant variant
/*!
* Matrix-matrix product
* C = C + mask .* (A * B) +: accum
* *: op
* .*: Boolean and
*/
template <typename c, typename m, typename a, typename b,
typename BinaryOpT, typename SemiringT>
Info mxm(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
SemiringT op,
const Matrix<a>* A,
const Matrix<b>* B,
Descriptor* desc) {
// Null pointer check
if (C == NULL || A == NULL || B == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
// Case 1: A *B
CHECK(checkDimRowCol(B, A, "B.nrows != A.ncols"));
CHECK(checkDimRowRow(A, C, "A.nrows != C.nrows"));
CHECK(checkDimColCol(B, C, "B.ncols != C.ncols"));
CHECK(checkDimRowRow(C, mask, "C.nrows != mask.nrows"));
CHECK(checkDimColCol(C, mask, "C.ncols != mask.ncols"));
// Case 2: AT*B
// Case 3: A *BT
// Case 4: AT*BT
const backend::Matrix<m>* mask_t = (mask == NULL) ? NULL : &mask->matrix_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::mxm<c, a, b, m>(&C->matrix_, mask_t, accum, op, &A->matrix_,
&B->matrix_, desc_t);
}
/*!
* Vector-matrix product
* w^T = w^T + mask^T .* (u^T * A) +: accum
* *: op
* .*: Boolean and
*/
template <typename W, typename M, typename U, typename a,
typename BinaryOpT, typename SemiringT>
Info vxm(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
SemiringT op,
const Vector<U>* u,
const Matrix<a>* A,
Descriptor* desc) {
// Null pointer check
if (w == NULL || u == NULL || A == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
Index u_nvals = 0;
CHECK(u->nvals(&u_nvals));
if (u_nvals == 0)
return GrB_UNINITIALIZED_OBJECT;
// Case 1: u*A
CHECK(checkDimRowSize(A, u, "A.nrows != u.size"));
CHECK(checkDimColSize(A, w, "A.ncols != w.size"));
CHECK(checkDimSizeSize(w, mask, "w.size != mask.size"));
// Case 2: u*AT
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::vxm<W, U, a, M>(&w->vector_, mask_t, accum, op, &u->vector_,
&A->matrix_, desc_t);
}
/*!
* Matrix-vector product
* w = w + mask .* (A * u) +: accum
* *: op
* .*: Boolean and
*/
template <typename W, typename M, typename a, typename U,
typename BinaryOpT, typename SemiringT>
Info mxv(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
SemiringT op,
const Matrix<a>* A,
const Vector<U>* u,
Descriptor* desc) {
// Null pointer check
// TODO(@ctcyang): need way to check op is not empty now that op is no longer
// pointer
if (w == NULL || u == NULL || A == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
Index u_nvals = 0;
CHECK(u->nvals(&u_nvals));
if (u_nvals == 0)
return GrB_UNINITIALIZED_OBJECT;
// Case 1: A *u
CHECK(checkDimColSize(A, u, "A.ncols != u.size"));
CHECK(checkDimRowSize(A, w, "A.nrows != w.size"));
CHECK(checkDimSizeSize(w, mask, "w.size != mask.size"));
// Case 2: AT*u
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::mxv<W, U, a, M>(&w->vector_, mask_t, accum, op, &A->matrix_,
&u->vector_, desc_t);
}
/*!
* Element-wise multiply of two vectors
* w = w + mask .* (u .* v) +: accum
* 2 1 1).*: op (semiring multiply)
* 2).*: Boolean and
*/
template <typename W, typename M, typename U, typename V,
typename BinaryOpT, typename SemiringT>
Info eWiseMult(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
SemiringT op,
const Vector<U>* u,
const Vector<V>* v,
Descriptor* desc) {
// Null pointer check
if (w == NULL || u == NULL || v == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
CHECK(checkDimSizeSize(u, v, "u.size != v.size"));
CHECK(checkDimSizeSize(u, w, "u.size != mask.size"));
CHECK(checkDimSizeSize(u, mask, "v.size != mask.size"));
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::eWiseMult(&w->vector_, mask_t, accum, op, &u->vector_,
&v->vector_, desc_t);
}
/*!
* Element-wise multiply of two matrices
* C = C + mask .* (A .* B) +: accum
* 2 1 1).*: op (semiring multiply)
* 2).*: Boolean and
*/
template <typename c, typename m, typename a, typename b,
typename BinaryOpT, typename SemiringT>
Info eWiseMult(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
SemiringT op,
const Matrix<a>* A,
const Matrix<b>* B,
Descriptor* desc) {
// Null pointer check
if (C == NULL || A == NULL || B == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
CHECK(checkDimRowRow(B, A, "B.nrows != A.nrows"));
CHECK(checkDimColCol(B, A, "B.ncols != A.ncols"));
CHECK(checkDimRowRow(A, C, "A.nrows != C.nrows"));
CHECK(checkDimColCol(A, C, "A.ncols != C.ncols"));
CHECK(checkDimRowRow(C, mask, "C.nrows != mask.nrows"));
CHECK(checkDimColCol(C, mask, "C.ncols != mask.ncols"));
const backend::Matrix<m>* mask_t = (mask == NULL) ? NULL : &mask->matrix_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::eWiseMult(&C->matrix_, mask_t, accum, op, &A->matrix_,
&B->matrix_, desc_t);
}
/*!
* Extension Method
* Element-wise multiply of a matrix and scalar which gets broadcasted
* C = C + mask .* (A .* val) +: accum
* 2 1 1).*: op (semiring multiply)
* 2).*: Boolean and
*
* TODO(@ctcyang): add scalar .* matrix variant for non-commutative semiring
* multiply
*/
template <typename c, typename m, typename a, typename b,
typename BinaryOpT, typename SemiringT>
Info eWiseMult(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
SemiringT op,
const Matrix<a>* A,
b val,
Descriptor* desc) {
// Null pointer check
if (C == NULL || A == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
CHECK(checkDimRowRow(A, C, "A.nrows != C.nrows"));
CHECK(checkDimColCol(A, C, "A.ncols != C.ncols"));
CHECK(checkDimRowRow(A, mask, "A.nrows != mask.nrows"));
CHECK(checkDimColCol(A, mask, "A.ncols != mask.ncols"));
const backend::Matrix<m>* mask_t = (mask == NULL) ? NULL : &mask->matrix_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::eWiseMult(&C->matrix_, mask_t, accum, op, &A->matrix_,
val, desc_t);
}
/*!
* Extension Method
* Element-wise multiply of a matrix and column vector which gets broadcasted.
* If row vector broadcast is needed instead, set Input 1 to be transposed.
* C = C + mask .* (A .* u) +: accum
* 2 1 1).*: op (semiring multiply)
* 2).*: Boolean and
*/
template <typename c, typename m, typename a, typename b,
typename BinaryOpT, typename SemiringT>
Info eWiseMult(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
SemiringT op,
const Matrix<a>* A,
const Vector<b>* B,
Descriptor* desc) {
// Null pointer check
if (C == NULL || A == NULL || B == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
//
// This check is dependent on whether GrB_INP1 is set to transpose or not, so
// we should delegate this check to backend
// CHECK(checkDimRowSize(A, B, "A.nrows != B.size")); // if B transposed
// CHECK(checkDimRowSize(A, B, "A.ncols != B.size")); // if B not transposed
CHECK(checkDimRowRow( A, C, "A.nrows != C.nrows"));
CHECK(checkDimColCol( A, C, "A.ncols != C.ncols"));
CHECK(checkDimRowRow( A, mask, "A.nrows != mask.nrows"));
CHECK(checkDimColCol( A, mask, "A.ncols != mask.ncols"));
const backend::Matrix<m>* mask_t = (mask == NULL) ? NULL : &mask->matrix_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::eWiseMult(&C->matrix_, mask_t, accum, op, &A->matrix_,
&B->vector_, desc_t);
}
/*!
* Element-wise addition of two vectors
* w = w + mask .* (u + v) +: accum
* .+: op (semiring add)
* .*: Boolean and
*/
template <typename W, typename M, typename U, typename V,
typename BinaryOpT, typename SemiringT>
Info eWiseAdd(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
SemiringT op,
const Vector<U>* u,
const Vector<V>* v,
Descriptor* desc) {
// Null pointer check
if (w == NULL || u == NULL || v == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
CHECK(checkDimSizeSize(u, v, "u.size != v.size"));
CHECK(checkDimSizeSize(u, mask, "u.size != mask.size"));
CHECK(checkDimSizeSize(v, mask, "v.size != mask.size"));
CHECK(checkDimSizeSize(w, mask, "w.size != mask.size"));
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::eWiseAdd(&w->vector_, mask_t, accum, op, &u->vector_,
&v->vector_, desc_t);
}
/*!
* Element-wise addition of two matrices
* C = C + mask .* (A .+ B) +: accum
* .+: op (semiring add)
* .*: Boolean and
*/
template <typename c, typename m, typename a, typename b,
typename BinaryOpT, typename SemiringT>
Info eWiseAdd(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
SemiringT op,
const Matrix<a>* A,
const Matrix<b>* B,
Descriptor* desc) {
// Use either op->operator() or op->add() as the case may be
std::cout << "Error: eWiseAdd matrix variant not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Extension Method
* Element-wise addition of a vector and scalar which gets broadcasted
* w = w + mask .* (u + val) +: accum
* .+: op (semiring add)
* .*: Boolean and
*
* TODO(@ctcyang): add scalar .+ vector variant for non-commutative semiring
* multiply
*/
template <typename W, typename M, typename U, typename V,
typename BinaryOpT, typename SemiringT>
Info eWiseAdd(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
SemiringT op,
const Vector<U>* u,
V val,
Descriptor* desc) {
// Null pointer check
if (w == NULL || u == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
CHECK(checkDimSizeSize(u, w, "u.size != mask.size"));
CHECK(checkDimSizeSize(u, mask, "v.size != mask.size"));
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::eWiseAdd(&w->vector_, mask_t, accum, op, &u->vector_,
val, desc_t);
}
/*!
* Subvector extraction from vector
* w = w + mask .* (u[indices]) +: accum
* .*: Boolean and
*/
template <typename W, typename M, typename U,
typename BinaryOpT>
Info extract(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
const Vector<U>* u,
const std::vector<Index>* indices,
Index nindices,
Descriptor* desc) {
std::cout << "Error: extract vector variant not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Submatrix extraction from matrix
* C = C + mask .* (A[row_indices, col_indices]) +: accum
* .*: Boolean and
*/
template <typename c, typename m, typename a,
typename BinaryOpT>
Info extract(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
const Matrix<a>* A,
const std::vector<Index>* row_indices,
Index nrows,
const std::vector<Index>* col_indices,
Index ncols,
Descriptor* desc) {
std::cout << "Error: extract matrix variant not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Column vector extraction from matrix
* w = w + mask .* (A[row_indices, col_index]) +: accum
* .*: Boolean and
*/
template <typename W, typename M, typename a,
typename BinaryOpT>
Info extract(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
const Matrix<a>* A,
const std::vector<Index>* row_indices,
Index nrows,
Index col_index,
Descriptor* desc) {
std::cout << "Error: extract matrix variant not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Assign vector to vector subset
* w[indices] = w[indices] + mask .* u +: accum
* .*: Boolean and
*/
template <typename W, typename M, typename U,
typename BinaryOpT>
Info assignIndexed(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
const Vector<U>* u,
int* indices,
Index nindices,
Descriptor* desc) {
// Null pointer check
if (w == NULL || u == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
// -only have one case (no transpose option)
CHECK(checkDimSizeSize(w, mask, "w.size != mask.size"));
auto mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::assignIndexed(&w->vector_, mask_t, accum, &u->vector_,
indices, nindices, desc_t);
}
/*!
* Assign matrix to matrix subset
* C[row_indices, col_indices] =
* C[row_indices, col_indices] + mask .* A +: accum
* .*: Boolean and
*/
template <typename c, typename m, typename a,
typename BinaryOpT>
Info assign(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
const Matrix<a>* A,
const std::vector<Index>* row_indices,
Index nrows,
const std::vector<Index>* col_indices,
Index ncols,
Descriptor* desc) {
std::cout << "Error: assign matrix variant not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Assign vector to matrix column subset
* C[row_indices, col_index] =
* C[row_indices, col_index] + mask .* u +: accum
* .*: Boolean and
*/
template <typename c, typename M, typename U,
typename BinaryOpT>
Info assign(Matrix<c>* C,
const Vector<M>* mask,
BinaryOpT accum,
const Vector<U>* u,
const std::vector<Index>* row_indices,
Index nrows,
Index col_index,
Descriptor* desc) {
std::cout << "Error: assign matrix variant not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Assign vector to matrix row subset
* C[row_index, col_indices] =
* C[row_index, col_indices] + mask .* u +: accum
* .*: Boolean and
*/
template <typename c, typename M, typename U,
typename BinaryOpT>
Info assign(Matrix<c>* C,
const Vector<M>* mask,
BinaryOpT accum,
const Vector<U>* u,
Index row_index,
const std::vector<Index>* col_indices,
Index ncols,
Descriptor* desc) {
std::cout << "Error: assign matrix variant not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Assign constant to vector subset
* w[indices] = w[indices] + val +: accum
* .*: Boolean and
*/
template <typename W, typename M, typename T, typename I,
typename BinaryOpT>
Info assign(Vector<W>* w,
Vector<M>* mask,
BinaryOpT accum,
T val,
const Vector<I>* indices,
Index nindices,
Descriptor* desc) {
// Null pointer check
if (w == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
// -only have one case (no transpose option)
CHECK(checkDimSizeSize(w, mask, "w.size != mask.size"));
auto mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
auto indices_t = (indices == NULL) ? NULL : &indices->vector_;
return backend::assign(&w->vector_, mask_t, accum, val, indices_t, nindices,
desc_t);
}
/*!
* Assign constant to matrix subset
* C[row_indices, col_indices] =
* C[row_indices, col_indices] + val +: accum
* .*: Boolean and
*/
template <typename c, typename m, typename T,
typename BinaryOpT>
Info assign(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
T val,
const std::vector<Index>* row_indices,
Index nrows,
const std::vector<Index>* col_indices,
Index ncols,
Descriptor* desc) {
std::cout << "Error: assign matrix variant not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Apply unary operation to vector
* w = w + mask .* op(u) +: accum
* .*: Boolean and
*/
template <typename W, typename M, typename U,
typename BinaryOpT, typename UnaryOpT>
Info apply(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
UnaryOpT op,
const Vector<U>* u,
Descriptor* desc) {
// Null pointer check
if (w == NULL || u == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
CHECK(checkDimSizeSize(u, w, "u.size != w.size"));
CHECK(checkDimSizeSize(u, mask, "u.size != mask.size"));
CHECK(checkDimSizeSize(w, mask, "w.size != mask.size"));
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::apply(&w->vector_, mask_t, accum, op, &u->vector_, desc_t);
}
/*!
* Apply unary operation to matrix
* w = w + mask .* op(u) +: accum
* .*: Boolean and
*/
template <typename c, typename m, typename a,
typename BinaryOpT, typename UnaryOpT>
Info apply(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
UnaryOpT op,
const Matrix<a>* A,
Descriptor* desc) {
// Null pointer check
if (A == NULL || C == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
CHECK(checkDimRowRow(A, C, "A.nrows != C.nrows"));
CHECK(checkDimColCol(A, C, "A.ncols != C.ncols"));
CHECK(checkDimRowRow(A, mask, "A.nrows != mask.nrows"));
CHECK(checkDimColCol(A, mask, "A.ncols != mask.ncols"));
CHECK(checkDimRowRow(C, mask, "C.nrows != mask.nrows"));
CHECK(checkDimColCol(C, mask, "C.ncols != mask.ncols"));
const backend::Matrix<m>* mask_t = (mask == NULL) ? NULL : &mask->matrix_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::apply(&C->matrix_, mask_t, accum, op, &A->matrix_, desc_t);
}
/*!
* Reduction along matrix rows to form vector
* w(i) = w(i) + mask(i) .* \sum_j A(i,j) for all j +: accum
* sum: op
* .*: Boolean and
*/
template <typename W, typename M, typename a,
typename BinaryOpT, typename MonoidT>
Info reduce(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
MonoidT op,
const Matrix<a>* A,
Descriptor* desc) {
if (w == NULL || A == NULL)
return GrB_UNINITIALIZED_OBJECT;
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::reduce(&w->vector_, mask_t, accum, op, &A->matrix_, desc_t);
}
/*!
* Reduction of vector to form scalar
* val = val + \sum_i u(i) for all i +: accum
* sum: op
*/
template <typename T, typename U,
typename BinaryOpT, typename MonoidT>
Info reduce(T* val,
BinaryOpT accum,
MonoidT op,
const Vector<U>* u,
Descriptor* desc) {
if (val == NULL || u == NULL)
return GrB_UNINITIALIZED_OBJECT;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::reduce(val, accum, op, &u->vector_, desc_t);
}
/*!
* Reduction of matrix to form scalar
* val = val + \sum_{i,j} A(i,j) for all i,j +: accum
* sum: op
*/
template <typename T, typename a,
typename BinaryOpT, typename MonoidT>
Info reduce(T* val,
BinaryOpT accum,
MonoidT op,
const Matrix<a>* A,
Descriptor* desc) {
if (val == NULL || A == NULL)
return GrB_UNINITIALIZED_OBJECT;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::reduce(val, accum, op, &A->matrix_, desc_t);
}
/*!
* Matrix transposition
* C = C + mask .* (A^T) +: accum
* .*: Boolean and
*/
template <typename c, typename m, typename a,
typename BinaryOpT>
Info transpose(Matrix<c>* C,
const Matrix<m>* mask,
BinaryOpT accum,
const Matrix<a>* A,
Descriptor* desc) {
std::cout << "Error: transpose not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Extension method
* Trace of matrix-matrix product
* val = Tr(A * B^T) *: op
*
* Note: A and B are assumed to be square matrices
*/
template <typename T, typename a, typename b,
typename SemiringT>
Info traceMxmTranspose(T* val,
SemiringT op,
const Matrix<a>* A,
const Matrix<b>* B,
Descriptor* desc) {
if (val == NULL || A == NULL || B == NULL)
return GrB_UNINITIALIZED_OBJECT;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::traceMxmTranspose(val, op, &A->matrix_, &B->matrix_, desc_t);
}
/*!
* Multiply matrix by scalar
* B = A * val *: op
*/
template <typename b, typename a, typename T,
typename BinaryOpT>
Info scale(Matrix<b>* B,
BinaryOpT op,
const Matrix<a>* A,
T val,
Descriptor* desc) {
std::cout << "Error: scale not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Multiply vector by scalar
* w = u * val *: op
*/
template <typename W, typename U, typename T,
typename BinaryOpT>
Info scale(Vector<W>* w,
BinaryOpT op,
const Vector<U>* u,
T val,
Descriptor* desc) {
std::cout << "Error: scale not implemented yet!\n";
return GrB_NOT_IMPLEMENTED;
}
/*!
* Extension method
* Scatter constant to indices of another vector w
* w[indices[i]] = mask .* val
*/
template <typename W, typename M, typename I, typename T>
Info scatter(Vector<W>* w,
const Vector<M>* mask,
const Vector<I>* indices,
T val,
Descriptor* desc) {
if (indices == NULL || w == NULL)
return GrB_UNINITIALIZED_OBJECT;
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::scatter(&w->vector_, mask_t, &indices->vector_, val, desc_t);
}
/*!
* Extension method
* Assign vector to vector subset when indices are already a GraphBLAS vector
* w[indices] = w[indices] + mask .* u +: accum
* .*: Boolean and
*/
template <typename W, typename M, typename U, typename I,
typename BinaryOpT>
Info assignScatter(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
const Vector<U>* u,
const Vector<I>* indices,
Descriptor* desc) {
// Null pointer check
if (w == NULL || u == NULL || indices == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
// -only have one case (no transpose option)
CHECK(checkDimSizeSize(w, mask, "w.size != mask.size"));
auto mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::assignScatter(&w->vector_, mask_t, accum, &u->vector_,
&indices->vector_, desc_t);
}
/*!
* Extension method
* Gather values in vector u from indices (vector index) and store in another
* vector w.
* w[i] = u[index[i]]
*/
template <typename W, typename M, typename U, typename I,
typename BinaryOpT>
Info extractGather(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
const Vector<U>* u,
const Vector<I>* indices,
Descriptor* desc) {
if (u == NULL || w == NULL || indices == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::extractGather(&w->vector_, mask_t, accum, &u->vector_,
&indices->vector_, desc_t);
}
template <typename W, typename a>
Info graphColor(Vector<W>* w,
const Matrix<a>* A,
Descriptor* desc) {
if (A == NULL || w == NULL)
return GrB_UNINITIALIZED_OBJECT;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::graphColor(&w->vector_, &A->matrix_, desc_t);
}
/*!
* Extension method
* Fused apply & vector-matrix product
* w^T = w^T + mask^T .* (u^T * A) +: accum
* *: op
* .*: Boolean and
*/
template <typename W, typename M, typename U, typename a,
typename BinaryOpT, typename SemiringT>
Info applyVxm(Vector<W>* w,
const Vector<M>* mask,
BinaryOpT accum,
SemiringT op,
const Vector<U>* u,
const Matrix<a>* A,
Descriptor* desc) {
// Null pointer check
if (w == NULL || u == NULL || A == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
Index u_nvals = 0;
CHECK(u->nvals(&u_nvals));
if (u_nvals == 0)
return GrB_UNINITIALIZED_OBJECT;
// Case 1: u*A
CHECK(checkDimRowSize(A, u, "A.nrows != u.size"));
CHECK(checkDimColSize(A, w, "A.ncols != w.size"));
CHECK(checkDimSizeSize(w, mask, "w.size != mask.size"));
// Case 2: u*AT
const backend::Vector<M>* mask_t = (mask == NULL) ? NULL : &mask->vector_;
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::applyVxm<W, U, a, M>(&w->vector_, mask_t, accum, op,
&u->vector_, &A->matrix_, desc_t);
}
/*!
* Extension method
* Zeroes out matrix above main diagonal
*/
template <typename c, typename a>
Info tril(Matrix<c>* C,
Matrix<a>* A,
Descriptor* desc) {
// Null pointer check
if (C == NULL || A == NULL || desc == NULL)
return GrB_UNINITIALIZED_OBJECT;
// Dimension check
CHECK(checkDimRowRow(A, C, "A.nrows != C.nrows"));
CHECK(checkDimColCol(A, C, "A.ncols != C.ncols"));
backend::Descriptor* desc_t = (desc == NULL) ? NULL : &desc->descriptor_;
return backend::tril(&C->matrix_, &A->matrix_, desc_t);
}
} // namespace graphblas
#endif // GRAPHBLAS_OPERATIONS_HPP_