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process.py
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process.py
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import numpy as np
import pandas as pd
import networkx as nx
import re
import random
import torch
from torch_geometric.data import Data
import time
import scipy.sparse as sp
from torch_geometric import loader
import time
import pickle
import copy
def unique(lists):
#delete duplicate attribute values
lists = list(map(lambda x: x.lower(), lists ))
if lists[0]=='':
res = []
else:
res = [lists[0]]
for i in range(len(lists)):
if i==0 or (lists[i] in lists[0:i]) or lists[i]=='':
continue
else:
res.append(lists[i])
return res
def construct_graph_from_df(df, G=None):
# construct graph according to df
if G is None:
G = nx.Graph()
for _, row in df.iterrows():
tid = 't_' + str(row['tweet_id'])
G.add_node(tid)
user_ids = row['user_mentions']
user_ids.append(row['user_id'])
user_ids = ['u_' + str(each) for each in user_ids]
G.add_nodes_from(user_ids)
words = row['filtered_words']
words = [('w_' + each).lower() for each in words]
G.add_nodes_from(words)
hashtags = row['hashtags']
hashtags = [('h_' + each).lower() for each in hashtags]
G.add_nodes_from(hashtags)
edges = []
#Connect the message node with each related user node, word node, etc
edges += [(tid, each) for each in user_ids]
edges += [(tid, each) for each in words]
edges += [(tid, each) for each in hashtags]
G.add_edges_from(edges)
return G
def construct_graph(data,feature,index):
#Build graph for a single tweet
G = nx.Graph()
X = []
tweet = data["text"].values
X.append(feature[index].tolist())
index = index+1
tweet_id = data["tweet_id"].values
G.add_node(tweet_id[0])
user_loc = data["user_loc"].values
f_w = data["filtered_words"].tolist()
edges = []
h_t = data["hashtags"].tolist()
h_t = h_t[0]
n = [user_loc[0]] + f_w[0] + h_t
n = unique(n)
if len(n)!=0:
for each in n:
X.append(feature[index].tolist())
index = index+1
G.add_nodes_from(n)
edges +=[(tweet_id[0], each) for each in n]
G.add_edges_from(edges)
return G,X
def normalize_adj(adj):
# Symmetrically normalize adjacency matrix
adj = sp.coo_matrix(adj)
rowsum = np.array(adj.sum(1))
d_inv_sqrt = np.power(rowsum, -0.5).flatten()
d_inv_sqrt[np.isinf(d_inv_sqrt)] = 0.
d_mat_inv_sqrt = sp.diags(d_inv_sqrt)
return adj.dot(d_mat_inv_sqrt).transpose().dot(d_mat_inv_sqrt).tocoo()
def aug_edge(adj): # edge perturbation
adj = np.array(adj)
aug_adj1 = np.array([[i for i in j] for j in adj])
aug_adj2 = np.array([[i for i in j] for j in adj])
p = np.random.randint(0,len(adj)-1)
aug_adj1[p][0] = 0
aug_adj1[0][p] = 0
t = np.random.randint(1,len(adj)-1)
aug_adj1[t][p] = 1
aug_adj1[p][t] = 1
p = np.random.randint(0,len(adj)-1)
aug_adj2[p][0] = 0
aug_adj2[0][p] = 0
t = np.random.randint(1,len(adj)-1)
aug_adj2[t][p] = 1
aug_adj2[p][t] = 1
return aug_adj1,aug_adj2
def get_edge_index(adj): #Get edge set according to adjacency matrix
edge_index1 = []
edge_index2 = []
for i in range(len(adj)):
for j in range(len(adj)):
if adj[i][j]==1 and i<j:
edge_index1.append(i)
edge_index2.append(j)
edge_index = [edge_index1] + [edge_index2]
return edge_index
def get_data(message_num,start,tweet_sum):
load_path = 'dataset/'
# load dataset
p_part1 = load_path + '68841_tweets_multiclasses_filtered_0722_part1.npy'
p_part2 = load_path + '68841_tweets_multiclasses_filtered_0722_part2.npy'
df_np_part1 = np.load(p_part1, allow_pickle=True)
df_np_part2 = np.load(p_part2, allow_pickle=True)
df_np = np.concatenate((df_np_part1, df_np_part2), axis=0)
df = pd.DataFrame(data=df_np, columns=["event_id", "tweet_id", "text", "user_id", "created_at", "user_loc",
"place_type", "place_full_name", "place_country_code", "hashtags",
"user_mentions", "image_urls", "entities",
"words", "filtered_words", "sampled_words"])
df = df.sort_values(by='created_at').reset_index()
ini_df = df[start:tweet_sum]
G = construct_graph_from_df(ini_df)
combined_features = np.load(load_path + 'features_69612_0709_spacy_lg_zero_multiclasses_filtered.npy')
A = nx.adjacency_matrix(G).todense().tolist()
X = []
nodes = list(G.node)
tweet=[]
j = 0
for i in range(len(nodes)):
t=nodes[i][0:2]
e=nodes[i][2:]
if t=="t_":
tweet.append(i)
index=list(ini_df["tweet_id"]).index(int(e))
X.append(list(combined_features[index]))
j=j+1
X = torch.tensor(X)
adj = np.array([[0]*len(tweet)]*len(tweet))
for i in range(len(tweet)):
for j in range(len(A)):
if A[tweet[i]][j]==1:
for s in range(len(tweet)):
if A[j][tweet[s]]==1 and s!=i:
adj[i][s] = 1
edge_index = get_edge_index(adj)
edge_index1 = copy.deepcopy(edge_index)
edge_index2 = copy.deepcopy(edge_index)
true_y = torch.tensor(list(ini_df['event_id']))
drop_percent = 0.2
i = 0
while 1:
if i >= len(G.edges)*drop_percent:
break
m1 = random.randint(0, len(edge_index1[0])-1)
m2 = random.randint(0, len(edge_index2[0])-1)
if m1==m2:
continue
else:
del edge_index1[0][m1]
del edge_index1[1][m1]
del edge_index2[0][m2]
del edge_index2[1][m2]
i = i + 1
edge_index = torch.tensor(edge_index)
edge_index1 = torch.tensor(edge_index1)
edge_index2 = torch.tensor(edge_index2)
dict_graph = {}
dict_graph['x'] = X
dict_graph['x1'] = X
dict_graph['x2'] = X
dict_graph['edge_index'] = edge_index
dict_graph['edge_index1'] = edge_index1
dict_graph['edge_index2'] = edge_index2
dict_graph['y'] = true_y
return dict_graph
def getData(M_num): #construct an entire graph within a block
# print(time.strftime('%Y-%m-%d %H:%M:%S', time.localtime(time.time())))
M =[20254,28976,30467,32302,34312,36146,37422,42700,44260,45623,46719,
47951,51188,53160,56116,58665,59575,62251,64138,65537,66430,68840]
if M_num == 0:
num = 0
size = 500
elif M_num == 1:
num = M[M_num-1]
size = 500
elif M[M_num]-M[M_num-1]>2000:
num = M[M_num-1]
size = 1000
else:
num = M[M_num-1]
size = M[M_num]-M[M_num-1]
data = []
i = M_num
j = 0
while 1:
if (num+size)>=M[i]:
tmp = get_data(i,num,M[i])
data.append(tmp)
break
else:
tmp = get_data(i,num,num+size)
data.append(tmp)
j = j + 1
num = num+size
return data
def get_Graph_Dataset(message_number):
print("\nBuilding graph-level social network...")
start_time = time.time()
#load data for graph-level contrastive learning
dataset = []
label = []
file_name = 'dataset/GCL-data/message_block_'+str(message_number)+'.npy'
data = np.load(file_name,allow_pickle=True)
for dict_data in data:
data = Data(x=dict_data['X'],x1=dict_data['x1'],x2=dict_data['x2'],
edge_index=dict_data['edge_index'],edge_index1=dict_data['edge_index1'],
edge_index2=dict_data['edge_index2'])
dataset.append(data)
label.append(dict_data['label'])
if message_number == 0 :
dataset = loader.DataLoader(dataset,batch_size=4096)
else:
dataset = loader.DataLoader(dataset,batch_size=len(dataset))
end_time = time.time()
run_time = end_time - start_time
print("Done! It takes "+str(int(run_time))+" seconds.\n")
return dataset,label
def get_Node_Dataset(message_number):
#load data for node-level contrastive learning
print("\nBuilding node-level social network...")
start_time = time.time()
datas = getData(message_number)
dataset = []
labels = []
for data in datas:
dict_data = data
dict_data['x'] = torch.tensor(np.array(dict_data['x']))
dict_data['x1'] = torch.tensor(np.array(dict_data['x1']))
dict_data['x2'] = torch.tensor(np.array(dict_data['x2']))
dict_data['edge_index'] = torch.tensor(np.array(dict_data['edge_index']))
dict_data['edge_index1'] = torch.tensor(np.array(dict_data['edge_index1']))
dict_data['edge_index2'] = torch.tensor(np.array(dict_data['edge_index2']))
data = Data(x=dict_data['x'],x1=dict_data['x1'],x2=dict_data['x2'],
edge_index=dict_data['edge_index'],edge_index1=dict_data['edge_index1'],
edge_index2=dict_data['edge_index2'])
label = dict_data['y']
if len(labels)==0:
labels = label
else:
labels = torch.cat([labels,label])
dataset.append(data)
end_time = time.time()
run_time = end_time - start_time
print("Done! It takes "+str(int(run_time))+" seconds.\n")
return dataset,np.array(labels).tolist()