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Deprecation Warning encountered when running lsort.py (possibly lmerge.py?) #75

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jeldred opened this issue Mar 31, 2016 · 0 comments · Fixed by #84
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Deprecation Warning encountered when running lsort.py (possibly lmerge.py?) #75

jeldred opened this issue Mar 31, 2016 · 0 comments · Fixed by #84
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@ernfrid
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v0.2.0

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@jeldred
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jeldred commented Mar 31, 2016

when running lsort.py a Deprecation Warning is encountered

python /gscmnt/gc2802/halllab/sv_aggregate/repo/svtools/svtools/lsort.py
/gscuser/jeldred/.local/lib/python2.6/site-packages/svtools-0.1.2-py2.6.egg/svtools/l_bp.py:2: DeprecationWarning: the sets module is deprecated
from sets import Set

according to Dave

the fix will be the same for all submodules
which is
move to using core set class instead of Set
@ernfrid ernfrid added this to the v0.2 milestone Apr 1, 2016
@ernfrid ernfrid self-assigned this Apr 1, 2016
@ernfrid ernfrid mentioned this issue Apr 4, 2016
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switch to using native set class for bron_kerbosh method ernfrid/svtools
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